RNA–Protein interactions for RNA: ENST00000340857.3

H1F0-201, Transcript of H1 histone family member 0, humanhuman

APPRIS P1 BASIC

Gene H1F0, Length 2,344 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H1F0-201ENST00000340857 STAG3L3P0CL85 134 aa13.47□□□□□ -0.25
H1F0-201ENST00000340857 CCKARP32238 428 aa13.47□□□□□ -0.25
H1F0-201ENST00000340857 SSTP61278 116 aa13.47□□□□□ -0.25
H1F0-201ENST00000340857 C9orf106Q8NAJ2 232 aa13.47□□□□□ -0.25
H1F0-201ENST00000340857 SFRP2Q96HF1 295 aa13.47□□□□□ -0.25
H1F0-201ENST00000340857 GGTLC1Q9BX51 225 aa13.47□□□□□ -0.25
H1F0-201ENST00000340857 M0R1X1 148 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 SLC31A2O15432 143 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 MIC13Q5XKP0 118 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 BTF3L4Q96K17 158 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 TXNDC17Q9BRA2 123 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 FAM234AQ9H0X4 552 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 JPT1Q9UK76 154 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 TRAPPC1Q9Y5R8 145 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 PXMP4Q9Y6I8 212 aa13.46□□□□□ -0.25
H1F0-201ENST00000340857 IGKV1D-17A0A075B6S4 117 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 TRAV3A0A0B4J244 114 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 A0A1B0GWJ7 208 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 RNF224P0DH78 156 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 RELBQ01201 579 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 RPL39P5Q59GN2 51 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 MBNL2Q5VZF2 373 aaKnown RBP13.46□□□□□ -0.26
H1F0-201ENST00000340857 MRPL41Q8IXM3 137 aaKnown RBP13.46□□□□□ -0.26
H1F0-201ENST00000340857 Q8NA96 180 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 SDSLQ96GA7 329 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 NDUFAF3Q9BU61 184 aa13.46□□□□□ -0.26
H1F0-201ENST00000340857 HCFC1P51610 2035 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 YPEL1O60688 119 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 CXorf1O96002 111 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 ABHD12Q8N2K0 398 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 SGMS2Q8NHU3 365 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 C1orf159Q96HA4 380 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 YPEL2Q96QA6 119 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 C2orf88Q9BSF0 95 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 ELOVL5Q9NYP7 299 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 IGLV1-44P01699 117 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 ZNF134P52741 427 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 LOXL3P58215 753 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 TAS2R60P59551 318 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 ERVK-16P61578 105 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 LY6DQ14210 128 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 SSX2Q16385 188 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 CR1LQ2VPA4 569 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 LBHQ53QV2 105 aaPredicted RBP13.45□□□□□ -0.26
H1F0-201ENST00000340857 FAM216AQ8WUB2 273 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 MISP3Q96FF7 219 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 TMEM204Q9BSN7 226 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 EPG5Q9HCE0 2579 aa13.45□□□□□ -0.26
H1F0-201ENST00000340857 RELNP78509 3460 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 IGHV2OR16-5A0A0B4J2B6 119 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 SCO2A0A1W2PP80 73 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 KALRNO60229 2985 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 IGHV3-13P01766 116 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 IGHV3-7P01780 117 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 C1orf174Q8IYL3 243 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 BEND2Q8NDZ0 799 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 IFI27L2Q9H2X8 130 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 TMEM140Q9NV12 185 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 DUSP13Q9UII6 198 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 LSM4Q9Y4Z0 139 aaKnown RBP13.44□□□□□ -0.26
H1F0-201ENST00000340857 CACNA1BQ00975 2339 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 MDFIC2A0A1B0GVS7 189 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 SRRM5B3KS81 715 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 NDUFB7P17568 137 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 OR2Z1Q8NG97 314 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 WFIKKN1Q96NZ8 548 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 PROCRQ9UNN8 238 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 TCF19Q9Y242 345 aa13.44□□□□□ -0.26
H1F0-201ENST00000340857 IGHV1-18A0A0C4DH31 117 aa13.43□□□□□ -0.26
H1F0-201ENST00000340857 MGST3O14880 152 aa13.43□□□□□ -0.26
H1F0-201ENST00000340857 SNRPCP09234 159 aaKnown RBP13.43□□□□□ -0.26
H1F0-201ENST00000340857 OR4A8P0C604 315 aa13.43□□□□□ -0.26
H1F0-201ENST00000340857 IQCJQ1A5X6 159 aa13.43□□□□□ -0.26
H1F0-201ENST00000340857 TMEM256Q8N2U0 113 aa13.43□□□□□ -0.26
H1F0-201ENST00000340857 S1PR3Q99500 378 aa13.43□□□□□ -0.26
H1F0-201ENST00000340857 YTHDF2Q9Y5A9 579 aaKnown RBP13.43□□□□□ -0.26
H1F0-201ENST00000340857 SPTA1P02549 2419 aa13.43□□□□□ -0.26
H1F0-201ENST00000340857 A0A1B0GUS0 222 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 F2RL2O00254 374 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 TIMP3P35625 211 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 C1orf229Q6ZS94 237 aaPredicted RBP13.42□□□□□ -0.26
H1F0-201ENST00000340857 DMRTC2Q8IXT2 367 aaPredicted RBP13.42□□□□□ -0.26
H1F0-201ENST00000340857 OCC1Q8TAD7 63 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 PPP1R35Q8TAP8 253 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 SSMEM1Q8WWF3 244 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 PLSCR4Q9NRQ2 329 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 TET2Q6N021 2002 aaPredicted RBP13.42□□□□□ -0.26
H1F0-201ENST00000340857 TRGV8A0A0C4DH27 118 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 TEX38Q6PEX7 206 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 BHLHA15Q7RTS1 189 aaPredicted RBP13.42□□□□□ -0.26
H1F0-201ENST00000340857 TCF23Q7RTU1 214 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 DDB2Q92466 427 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 CHODLQ9H9P2 273 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 NPVFQ9HCQ7 196 aa13.42□□□□□ -0.26
H1F0-201ENST00000340857 NUPR1O60356 82 aa13.41□□□□□ -0.26
H1F0-201ENST00000340857 IL6RP08887 468 aaPredicted RBP13.41□□□□□ -0.26
H1F0-201ENST00000340857 KIR2DS2P43631 304 aa13.41□□□□□ -0.26
H1F0-201ENST00000340857 YPEL3P61236 119 aaPredicted RBP13.41□□□□□ -0.26
H1F0-201ENST00000340857 ARSJQ5FYB0 599 aaPredicted RBP13.41□□□□□ -0.26
H1F0-201ENST00000340857 UTF1Q5T230 341 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms