RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 ZNF134P52741 427 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 RPL31P62899 125 aaKnown RBP11.94□□□□□ -0.5
CPSF7-201ENST00000340437 PYGO2Q9BRQ0 406 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 TMEM140Q9NV12 185 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 ZNRD1Q9P1U0 126 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 WDR83OSQ9Y284 106 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 YTHDF2Q9Y5A9 579 aaKnown RBP11.94□□□□□ -0.5
CPSF7-201ENST00000340437 LAMA5O15230 3695 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 FCN1O00602 326 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 IGHV3-48P01763 117 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 TMEM178AQ8NBL3 297 aa11.94□□□□□ -0.5
CPSF7-201ENST00000340437 PDE6DO43924 150 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 GGCTO75223 188 aaKnown RBP11.93□□□□□ -0.5
CPSF7-201ENST00000340437 GCGP01275 180 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 MGST1P10620 155 aaKnown RBP11.93□□□□□ -0.5
CPSF7-201ENST00000340437 MDS2Q8NDY4 140 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 CMTM2Q8TAZ6 248 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 CGAP01215 116 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 TDRG1Q3Y452 100 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 NHLRC2Q8NBF2 726 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 NDUFAF3Q9BU61 184 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 C21orf140B9A014 251 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 M0R1B8 84 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 OR7C2O60412 319 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 TDGF1P13385 188 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 HTD2P86397 168 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 MLANAQ16655 118 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 GBGT1Q8N5D6 347 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 C9orf106Q8NAJ2 232 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 Q8TCH9 128 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 VN1R17PQ8TDU5 208 aa11.93□□□□□ -0.5
CPSF7-201ENST00000340437 TMEM210A6NLX4 147 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 F2Z2F3 143 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 DUX4L9Q6RFH8 374 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-201ENST00000340437 DOLPP1Q86YN1 238 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 NAGKQ9UJ70 344 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 TCF19Q9Y242 345 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 DMXL2Q8TDJ6 3036 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 IGFBP2P18065 325 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 TIMP3P35625 211 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 RPP30P78346 268 aaKnown RBP11.92□□□□□ -0.5
CPSF7-201ENST00000340437 PSG5Q15238 335 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 RND1Q92730 232 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 HSPB9Q9BQS6 159 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 HPRT1P00492 218 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 IL6RP08887 468 aaPredicted RBP11.92□□□□□ -0.5
CPSF7-201ENST00000340437 MORN2Q502X0 79 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 OR8I2Q8N0Y5 310 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 OR1L6Q8NGR2 347 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 GGTLC1Q9BX51 225 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 PARD6AQ9NPB6 346 aa11.92□□□□□ -0.5
CPSF7-201ENST00000340437 M0R296 226 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 P0C879 139 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 CRISP2P16562 243 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 KRTDAPP60985 99 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 SPCS3P61009 180 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 SSTP61278 116 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 INO80CQ6PI98 192 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-201ENST00000340437 CENPVQ7Z7K6 275 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-201ENST00000340437 STPG3Q8N7X2 389 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 PARD6GQ9BYG4 376 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-201ENST00000340437 SPRY4Q9C004 299 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 PLEKHA3Q9HB20 300 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 SNURFLB1AK76 121 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 VENTXO95231 258 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 CRYBB3P26998 211 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 TRIP6Q15654 476 aaKnown RBP11.91□□□□□ -0.5
CPSF7-201ENST00000340437 ACSF3Q4G176 576 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-201ENST00000340437 MIR17HGQ75NE6 70 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 NOL4LQ96MY1 436 aaPredicted RBP11.91□□□□□ -0.5
CPSF7-201ENST00000340437 KCNIP2Q9NS61 270 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 ELOVL5Q9NYP7 299 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 Q6ZT83 130 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 FDCSPQ8NFU4 85 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 UHRF2Q96PU4 802 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 OR2V2Q96R30 315 aa11.91□□□□□ -0.5
CPSF7-201ENST00000340437 MRPL18Q9H0U6 180 aaKnown RBP11.91□□□□□ -0.5
CPSF7-201ENST00000340437 PLXNB1O43157 2135 aa11.9□□□□□ -0.5
CPSF7-201ENST00000340437 A6NNC1 897 aa11.9□□□□□ -0.5
CPSF7-201ENST00000340437 CXorf1O96002 111 aa11.9□□□□□ -0.5
CPSF7-201ENST00000340437 CA2P00918 260 aa11.9□□□□□ -0.5
CPSF7-201ENST00000340437 MRPL54Q6P161 138 aaKnown RBP11.9□□□□□ -0.5
CPSF7-201ENST00000340437 C1orf229Q6ZS94 237 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-201ENST00000340437 IGKV1D-17A0A075B6S4 117 aa11.9□□□□□ -0.5
CPSF7-201ENST00000340437 SERF1AO75920 110 aa11.9□□□□□ -0.5
CPSF7-201ENST00000340437 GCHFRP30047 84 aa11.9□□□□□ -0.5
CPSF7-201ENST00000340437 SNHG12Q9BXW3 62 aa11.9□□□□□ -0.5
CPSF7-201ENST00000340437 MRPL37Q9BZE1 423 aaKnown RBP11.9□□□□□ -0.5
CPSF7-201ENST00000340437 RNASE7Q9H1E1 156 aaKnown RBP11.9□□□□□ -0.5
CPSF7-201ENST00000340437 ZNF71Q9NQZ8 489 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-201ENST00000340437 POLR3KQ9Y2Y1 108 aaPredicted RBP11.9□□□□□ -0.5
CPSF7-201ENST00000340437 GFRA3O60609 400 aa11.9□□□□□ -0.51
CPSF7-201ENST00000340437 PMCHP20382 165 aa11.9□□□□□ -0.51
CPSF7-201ENST00000340437 NPY1RP25929 384 aa11.9□□□□□ -0.51
CPSF7-201ENST00000340437 LHFPL4Q7Z7J7 247 aa11.9□□□□□ -0.51
CPSF7-201ENST00000340437 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.51
CPSF7-201ENST00000340437 FAM208BQ5VWN6 2430 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 CCKARP32238 428 aa11.89□□□□□ -0.51
CPSF7-201ENST00000340437 KIR2DL2P43627 348 aaPredicted RBP11.89□□□□□ -0.51
CPSF7-201ENST00000340437 EFNB3Q15768 340 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms