RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 SLC35D1Q9NTN3 355 aa9.99□□□□□ -0.81
USP1-201ENST00000339950 LAMA5O15230 3695 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 FBLL1A6NHQ2 334 aaKnown RBP9.98□□□□□ -0.81
USP1-201ENST00000339950 RNASEKQ6P5S7 137 aaKnown RBP9.98□□□□□ -0.81
USP1-201ENST00000339950 RBMXL3Q8N7X1 1067 aaKnown RBP9.98□□□□□ -0.81
USP1-201ENST00000339950 NOL4LQ96MY1 436 aaPredicted RBP9.98□□□□□ -0.81
USP1-201ENST00000339950 RBM14Q96PK6 669 aaKnown RBP9.98□□□□□ -0.81
USP1-201ENST00000339950 TAAR6Q96RI8 345 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 SRD5A3Q9H8P0 318 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 TRAV17A0A0B4J275 112 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 SCO2A0A1W2PP80 73 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 LRRC75BQ2VPJ9 315 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 C2CD3Q4AC94 2353 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 TGIF2LYQ8IUE0 185 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 HIST3H2BBQ8N257 126 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 OR8G5Q8NG78 346 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 WNT10AQ9GZT5 417 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 PLSCR2Q9NRY7 297 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 DECR2Q9NUI1 292 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 CA1P00915 261 aaPredicted RBP9.98□□□□□ -0.81
USP1-201ENST00000339950 OR10J1P30954 320 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 KLF3P57682 345 aaPredicted RBP9.98□□□□□ -0.81
USP1-201ENST00000339950 Q56UQ5 140 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 PEAR1Q5VY43 1037 aaPredicted RBP9.98□□□□□ -0.81
USP1-201ENST00000339950 ZNF645Q8N7E2 425 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 NPCDR1Q9BY65 106 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 TMEM140Q9NV12 185 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 IL36GQ9NZH8 169 aa9.98□□□□□ -0.81
USP1-201ENST00000339950 EREGO14944 169 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 CEACAM1P13688 526 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 RPL23P62829 140 aaKnown RBP9.97□□□□□ -0.81
USP1-201ENST00000339950 MOB1BQ7L9L4 216 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 BHLHA15Q7RTS1 189 aaPredicted RBP9.97□□□□□ -0.81
USP1-201ENST00000339950 GMPPAQ96IJ6 420 aaPredicted RBP9.97□□□□□ -0.81
USP1-201ENST00000339950 TRGV10A0A0A0MS01 117 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 OPRK1P41145 380 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 TIGITQ495A1 244 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 SPRNQ5BIV9 151 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 IGFBPL1Q8WX77 278 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 MS4A5Q9H3V2 200 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 SDF2L1Q9HCN8 221 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 ARHGAP32A7KAX9 2087 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 USP9YO00507 2555 aaPredicted RBP9.97□□□□□ -0.81
USP1-201ENST00000339950 C21orf140B9A014 251 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 CD59P13987 128 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 CRYBB3P26998 211 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 CD82P27701 267 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 CHRNB4P30926 498 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 TNFSF10P50591 281 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 UTF1Q5T230 341 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 TMEM183AQ8IXX5 376 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 OR5B3Q8NH48 314 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 COQ2Q96H96 371 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 MYO9AB2RTY4 2548 aa9.97□□□□□ -0.81
USP1-201ENST00000339950 DIRC3C9JPN6 131 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 IGHV2-5P01817 119 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 CSN3P07498 182 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 OR4A8P0C604 315 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 CCL3L1P16619 93 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 ACP1P24666 158 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 C10orf55Q5SWW7 151 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 FAM90A2PQ658T7 463 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 Q6P435 159 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 WDR82Q6UXN9 313 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 Q6ZR03 302 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 FOXL2NBQ6ZUU3 175 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 OR8I2Q8N0Y5 310 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 NDUFAF3Q9BU61 184 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 DNAJC4Q9NNZ3 241 aa9.96□□□□□ -0.81
USP1-201ENST00000339950 B4DEV8 164 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 CGAP01215 116 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 FTH1P19P0C7X4 201 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 NPY1RP25929 384 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 ACP7Q6ZNF0 438 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 ZNF497Q6ZNH5 498 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 ZFYVE26Q68DK2 2539 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 LYNX1G3V0Z9 82 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 HPRT1P00492 218 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 LYNX1P0DP58 116 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 TNFSF4P23510 183 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 HES1Q14469 280 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 ARSJQ5FYB0 599 aaPredicted RBP9.96□□□□□ -0.82
USP1-201ENST00000339950 ASCL2Q99929 193 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 RNF115Q9Y4L5 304 aa9.96□□□□□ -0.82
USP1-201ENST00000339950 IGHV3-35A0A0C4DH35 117 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 J3QR06 171 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 FOXH1O75593 365 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 AMBPP02760 352 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 IGFBP2P18065 325 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 RANP62826 216 aaKnown RBP9.95□□□□□ -0.82
USP1-201ENST00000339950 SERF2P84101 59 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 GABRA6Q16445 453 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 TRAT1Q6PIZ9 186 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 TMEM256Q8N2U0 113 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 SPSB4Q96A44 273 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 ZNF835Q9Y2P0 537 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 CCKARP32238 428 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 CD81P60033 236 aa9.95□□□□□ -0.82
USP1-201ENST00000339950 OR10W1Q8NGF6 305 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms