RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 Q6ZR03 302 aa15.58■□□□□ 0.08
PSPC1-201ENST00000338910 MOB1BQ7L9L4 216 aa15.58■□□□□ 0.08
PSPC1-201ENST00000338910 Q8N7P7 452 aa15.58■□□□□ 0.08
PSPC1-201ENST00000338910 TRAPPC2LQ9UL33 140 aa15.58■□□□□ 0.08
PSPC1-201ENST00000338910 MDFIC2A0A1B0GVS7 189 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 F6UZH7 168 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 RAMP3O60896 148 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 KRASP01116 189 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 MSMO1Q15800 293 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 ZNF474Q6S9Z5 364 aaPredicted RBP15.57■□□□□ 0.08
PSPC1-201ENST00000338910 C11orf53Q8IXP5 236 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 VN1R17PQ8TDU5 208 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 ZG16O60844 167 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 CBLN1P23435 193 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 ZNF83P51522 516 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 RPS16P62249 146 aaKnown RBP15.57■□□□□ 0.08
PSPC1-201ENST00000338910 ZNF146Q15072 292 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 ZNF718Q3SXZ3 478 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 KRTCAP3Q53RY4 240 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 C1orf185Q5T7R7 199 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 PRAMEF6Q5VXH4 476 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 ZGRF1Q86YA3 2104 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 OR5AU1Q8NGC0 362 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 ZFP30Q9Y2G7 519 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 SLC25A15Q9Y619 301 aa15.57■□□□□ 0.08
PSPC1-201ENST00000338910 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.56■□□□□ 0.08
PSPC1-201ENST00000338910 ODAMA1E959 279 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 RNF212BA8MTL3 300 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 C17orf112F2Z3M2 114 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 CRISP2P16562 243 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 KITLGP21583 273 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 G6PCP35575 357 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 TBR1Q16650 682 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 COL5A1-AS1Q5SY13 56 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 DTD1Q8TEA8 209 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 CHODLQ9H9P2 273 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 MSRB2Q9Y3D2 182 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 ZZEF1O43149 2961 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 K7ENP7 123 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 TIMP3P35625 211 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 ZNF497Q6ZNH5 498 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 RAB1CQ92928 201 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 ZDHHC16Q969W1 377 aa15.56■□□□□ 0.08
PSPC1-201ENST00000338910 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.56■□□□□ 0.08
PSPC1-201ENST00000338910 TFF1P04155 84 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 TFPI2P48307 235 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 GCSAMLQ5JQS6 135 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 CXXC4Q9H2H0 198 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 TRAV38-1A0A0B4J264 116 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 TMEM238LA0A1B0GVL6 79 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 PSPNO60542 156 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 HAND1O96004 215 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 MRPL18Q9H0U6 180 aaKnown RBP15.55■□□□□ 0.08
PSPC1-201ENST00000338910 DUSP13Q9UII6 198 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 CADP27708 2225 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 USF3Q68DE3 2245 aa15.55■□□□□ 0.08
PSPC1-201ENST00000338910 Q8NA96 180 aa15.54■□□□□ 0.08
PSPC1-201ENST00000338910 OR10G8Q8NGN5 311 aa15.54■□□□□ 0.08
PSPC1-201ENST00000338910 TRAV9-1A0A075B6T8 112 aa15.54■□□□□ 0.08
PSPC1-201ENST00000338910 M0R1B8 84 aa15.54■□□□□ 0.08
PSPC1-201ENST00000338910 SIAH2O43255 324 aa15.54■□□□□ 0.08
PSPC1-201ENST00000338910 COTL1Q14019 142 aa15.54■□□□□ 0.08
PSPC1-201ENST00000338910 FAM57AQ8TBR7 257 aa15.54■□□□□ 0.08
PSPC1-201ENST00000338910 YLPM1P49750 1951 aaKnown RBP15.54■□□□□ 0.08
PSPC1-201ENST00000338910 F2Z2F3 143 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 RAB7AP51149 207 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 CIB3Q96Q77 187 aaPredicted RBP15.53■□□□□ 0.08
PSPC1-201ENST00000338910 HES4Q9HCC6 221 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 WIPI2Q9Y4P8 454 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 RPL30P62888 115 aaKnown RBP15.53■□□□□ 0.08
PSPC1-201ENST00000338910 ZNF90Q03938 601 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 Q0VG73 95 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 ZNF816Q0VGE8 651 aaPredicted RBP15.53■□□□□ 0.08
PSPC1-201ENST00000338910 MSMPQ1L6U9 139 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 WDR82Q6UXN9 313 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 OR4B1Q8NGF8 309 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 OCC1Q8TAD7 63 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 DNAJC4Q9NNZ3 241 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 MBNL3Q9NUK0 354 aaKnown RBP15.53■□□□□ 0.08
PSPC1-201ENST00000338910 RNF114Q9Y508 228 aa15.53■□□□□ 0.08
PSPC1-201ENST00000338910 PCNX1Q96RV3 2341 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 S1PR2O95136 353 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 MBNL2Q5VZF2 373 aaKnown RBP15.52■□□□□ 0.08
PSPC1-201ENST00000338910 C11orf42Q8N5U0 333 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 Q8N976 141 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 OR2Z1Q8NG97 314 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 C5orf30Q96GV9 206 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 TXNDC17Q9BRA2 123 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 SAMD10Q9BYL1 202 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 TUBG2Q9NRH3 451 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 IL36BQ9NZH7 164 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 FBXL7Q9UJT9 491 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 WDR83OSQ9Y284 106 aa15.52■□□□□ 0.08
PSPC1-201ENST00000338910 SPTA1P02549 2419 aa15.52■□□□□ 0.07
PSPC1-201ENST00000338910 TCF21O43680 179 aa15.52■□□□□ 0.07
PSPC1-201ENST00000338910 CTRLP40313 264 aa15.52■□□□□ 0.07
PSPC1-201ENST00000338910 BAGE3Q86Y29 109 aa15.52■□□□□ 0.07
PSPC1-201ENST00000338910 BAGE2Q86Y30 109 aa15.52■□□□□ 0.07
PSPC1-201ENST00000338910 ZNF645Q8N7E2 425 aa15.52■□□□□ 0.07
PSPC1-201ENST00000338910 SLC35E1Q96K37 410 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms