RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 VSTM2AQ8TAG5 236 aa10.08□□□□□ -0.8
NUDCD3-201ENST00000338427 WDR89Q96FK6 387 aaPredicted RBP10.08□□□□□ -0.8
NUDCD3-201ENST00000338427 FAM110AQ9BQ89 295 aa10.08□□□□□ -0.8
NUDCD3-201ENST00000338427 NEURL2Q9BR09 285 aa10.08□□□□□ -0.8
NUDCD3-201ENST00000338427 IGHV3-21A0A0B4J1V1 117 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 ZNF320A2RRD8 509 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 RBMY1BA6NDE4 496 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 RBMY1EA6NEQ0 496 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 XRCC3O43542 346 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 AIREO43918 545 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 CREBL2O60519 120 aaPredicted RBP10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 CLEC3BP05452 202 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 RBMY1DP0C7P1 496 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 MAS1LP35410 378 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 ARL3P36405 182 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 CD81P60033 236 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 KCTD21Q4G0X4 260 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 TM4SF20Q53R12 229 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 LINC00322Q6ZN03 302 aaPredicted RBP10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 GTSCR1Q86UQ5 136 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 LYSMD2Q8IV50 215 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 ZBTB34Q8NCN2 500 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 KCTD12Q96CX2 325 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 S100A16Q96FQ6 103 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 BET1LQ9NYM9 111 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 EHFQ9NZC4 300 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 NSG2Q9Y328 171 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 LYSTQ99698 3801 aa10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 PLECQ15149 4684 aaKnown RBP10.07□□□□□ -0.8
NUDCD3-201ENST00000338427 HYDINQ4G0P3 5121 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 IGLV11-55A0A075B6I3 123 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 A0A0A6YYH2 397 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 TEX50A0A1B0GTY4 177 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 IGLC7A0M8Q6 106 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 A6NJ64 397 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 PGLYRP1O75594 196 aaPredicted RBP10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 HPRT1P00492 218 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 DEFA4P12838 97 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 CBLN1P23435 193 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 LPAR6P43657 344 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 SCAND1P57086 179 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 TAS2R20P59543 309 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 DHRS11Q6UWP2 260 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 UNQ9165/PRO28630Q6UXU0 137 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 SAMD12Q8N8I0 201 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 DYNLRB2Q8TF09 96 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 ZNF2Q9BSG1 426 aaPredicted RBP10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 MLXQ9UH92 298 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 DNAH1Q9P2D7 4330 aa10.06□□□□□ -0.8
NUDCD3-201ENST00000338427 EIF4EP06730 217 aaKnown RBP10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 CBX5P45973 191 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 MFAP2P55001 183 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 KLK9Q2XQG4 91 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 ZNF585BQ52M93 769 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 AADACL3Q5VUY0 350 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 UXS1Q8NBZ7 420 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 DMBX1Q8NFW5 382 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 EEF1AKMT3Q96AZ1 226 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 SPATA25Q9BR10 227 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 HIPK2Q9H2X6 1198 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 PALMDQ9NP74 551 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 IFT46Q9NQC8 304 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 TMEM140Q9NV12 185 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 KLK9Q9UKQ9 250 aa10.05□□□□□ -0.8
NUDCD3-201ENST00000338427 TMEM213A2RRL7 107 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 OR11H12B2RN74 326 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 RBFOX2O43251 390 aaKnown RBP eCLIP10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 NQO2P16083 231 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 HLA-DMAP28067 261 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 TAS2R31P59538 309 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 HERV-K104P61576 105 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 NCS1P62166 190 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 MSMO1Q15800 293 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 POU2AF1Q16633 256 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 TSPAN14Q8NG11 270 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 OR2K2Q8NGT1 345 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 OR4A5Q8NH83 315 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 FCAMRQ8WWV6 532 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 HINT2Q9BX68 163 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 COMMD3Q9UBI1 195 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 ANAPC10Q9UM13 185 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 CEPT1Q9Y6K0 416 aa10.04□□□□□ -0.8
NUDCD3-201ENST00000338427 DBX1A6NMT0 343 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 LGALS9O00182 355 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 TPPPO94811 219 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 SCAF4O95104 1147 aaKnown RBP10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 KRASP01116 189 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 RLN1P04808 185 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 OR13C7P0DN81 318 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 NAT1P18440 290 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 GPR183P32249 361 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 PRSS3P35030 304 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 G6PCP35575 357 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 WT1-ASQ06250 92 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 CATR1Q13166 79 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 FAM106AQ4KMX7 169 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 UBE2NLQ5JXB2 153 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 TMEM69Q5SWH9 247 aa10.03□□□□□ -0.8
NUDCD3-201ENST00000338427 SLC25A24Q6NUK1 477 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms