RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 OPN1MW2P0DN77 364 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OPN1MW3P0DN78 364 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 HSPE1P61604 102 aaKnown RBP11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 NHLH2Q02577 135 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 KLF17Q5JT82 389 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TMEM252Q8N6L7 170 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OR4A5Q8NH83 315 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 BSCL2Q96G97 398 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 EAF1Q96JC9 268 aaPredicted RBP11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 RNF5Q99942 180 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 GON7Q9BXV9 100 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TCF19Q9Y242 345 aa11.83□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SMAD7O15105 426 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 BCL2L11O43521 198 aa11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 F2RL1P55085 397 aa11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 RPL8P62917 257 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 EWSR1Q01844 656 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CYB5R2Q6BCY4 276 aa11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TEX45Q8NA69 505 aa11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OR2T10Q8NGZ9 312 aa11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ARPC5LQ9BPX5 153 aa11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ZNF430Q9H8G1 570 aaPredicted RBP11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FKBP11Q9NYL4 201 aa11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 METTL1Q9UBP6 276 aaKnown RBP11.82□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TEX50A0A1B0GTY4 177 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PLXNB1O43157 2135 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CRYGBP07316 175 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TAS2R30P59541 319 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PJVKQ0ZLH3 352 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 MMDQ15546 238 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PDLIM3Q53GG5 364 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SPANXN5Q5MJ07 72 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FAM120AOSQ5T036 256 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 HINT2Q9BX68 163 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SMIM3Q9BZL3 60 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SLC25A31Q9H0C2 315 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FBXL15Q9H469 300 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SLA2Q9H6Q3 261 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CACFD1Q9UGQ2 172 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SOX21Q9Y651 276 aaPredicted RBP11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ABCA1O95477 2261 aa11.81□□□□□ -0.52
CDK5RAP3-201ENST00000338399 A0A0U1RQK1 487 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CST7O76096 145 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FGF2P09038 288 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 BRS3P32247 399 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 HOXA1P49639 335 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TMEM267Q0VDI3 215 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 MRGPRG-AS1Q2M3A8 158 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CIB3Q96Q77 187 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CLCC1Q96S66 551 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 COMMD5Q9GZQ3 224 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ZNF257Q9Y2Q1 563 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SIGLEC9Q9Y336 463 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CELSR1Q9NYQ6 3014 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CCDC168Q8NDH2 2452 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ZNF469Q96JG9 3925 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 VDAC2P45880 294 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 EBI3Q14213 229 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ZNF471Q9BX82 626 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 HEYLQ9NQ87 328 aaPredicted RBP11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FBXL17Q9UF56 701 aa11.8□□□□□ -0.52
CDK5RAP3-201ENST00000338399 RRHO14718 337 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 NBR2O15453 112 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SPDEFO95238 335 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 METTL15P1P0C7V9 234 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FAM106CPP0CH98 169 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TMEM11P17152 192 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PRCDQ00LT1 54 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PLGLAQ15195 96 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PRSS8Q16651 343 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SLC51BQ86UW2 128 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PPP1R27Q86WC6 154 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TMEM217Q8N7C4 229 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OR8H1Q8NGG4 311 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OR5B3Q8NH48 314 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 HIPK2Q9H2X6 1198 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CYTL1Q9NRR1 136 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FAM96BQ9Y3D0 163 aa11.79□□□□□ -0.52
CDK5RAP3-201ENST00000338399 E7EUB6 86 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 THNSL2Q86YJ6 484 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 MMD2Q8IY49 270 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 Q8N6K4 173 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 NPBQ8NG41 125 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OR1L8Q8NGR8 309 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 OR4C12Q96R67 309 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 MEGF9Q9H1U4 602 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 KIAA1456Q9P272 454 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 FCN1O00602 326 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TAAR5O14804 337 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 NDUFA3O95167 84 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 CFDP00746 253 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 SULT1A1P50225 295 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 DYNLT3P51808 116 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 BAXQ07812 192 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TNXAQ16473 311 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 TMEM14EPQ6UXP3 125 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 STX12Q86Y82 276 aa11.78□□□□□ -0.52
CDK5RAP3-201ENST00000338399 PLEKHA3Q9HB20 300 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms