RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 PLGLAQ15195 96 aa17.08■□□□□ 0.32
TPM1-204ENST00000334895 DUX5Q96PT3 197 aa17.08■□□□□ 0.32
TPM1-204ENST00000334895 FYTTD1Q96QD9 318 aaKnown RBP17.08■□□□□ 0.32
TPM1-204ENST00000334895 RANGRFQ9HD47 186 aaPredicted RBP17.08■□□□□ 0.32
TPM1-204ENST00000334895 ESM1Q9NQ30 184 aa17.08■□□□□ 0.32
TPM1-204ENST00000334895 FOXA2Q9Y261 457 aaPredicted RBP17.08■□□□□ 0.32
TPM1-204ENST00000334895 ST8SIA3O43173 380 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 C10orf55Q5SWW7 151 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 ZNF429Q86V71 674 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 NEURL2Q9BR09 285 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 PRNDQ9UKY0 176 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 POMT1Q9Y6A1 747 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 BTBD17A6NE02 478 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 SH2D7A6NKC9 451 aaPredicted RBP17.07■□□□□ 0.32
TPM1-204ENST00000334895 FGF16O43320 207 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 RBMXL2O75526 392 aaKnown RBP17.07■□□□□ 0.32
TPM1-204ENST00000334895 CA2P00918 260 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 RBMS3Q6XE24 437 aaKnown RBP17.07■□□□□ 0.32
TPM1-204ENST00000334895 MMD2Q8IY49 270 aa17.07■□□□□ 0.32
TPM1-204ENST00000334895 DNAJC9-AS1A6NH13 148 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 E7EUB6 86 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 CCNKO75909 580 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 MBPP02686 304 aaPredicted RBP17.06■□□□□ 0.32
TPM1-204ENST00000334895 OPN1MWP04001 364 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 FGF2P09038 288 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 FAM157CP0CG43 387 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 OPN1MW2P0DN77 364 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 OPN1MW3P0DN78 364 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 ID3Q02535 119 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 C16orf82Q7Z2V1 217 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 AKAP14Q86UN6 197 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 TMEM86BQ8N661 226 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 HSPB7Q9UBY9 170 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 OR51B2Q9Y5P1 312 aa17.06■□□□□ 0.32
TPM1-204ENST00000334895 TEX50A0A1B0GTY4 177 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 A0A1B0GW64 132 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 CGB1A6NKQ9 187 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 G3V3Q6 166 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 HLA-DRB1P01911 266 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 Q5BKY6 102 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 PPP1R1CQ8WVI7 109 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 RASL11BQ9BPW5 248 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 HSPB9Q9BQS6 159 aa17.05■□□□□ 0.32
TPM1-204ENST00000334895 SCGB1D2O95969 90 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 NKX2-1P43699 371 aaPredicted RBP17.04■□□□□ 0.32
TPM1-204ENST00000334895 RAP2BP61225 183 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 CYCSP99999 105 aaKnown RBP17.04■□□□□ 0.32
TPM1-204ENST00000334895 NDPQ00604 133 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 TNFRSF9Q07011 255 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 RAB32Q13637 225 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 TNXAQ16473 311 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 SPINK9Q5DT21 86 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 C11orf87Q6NUJ2 197 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 ASB13Q8WXK3 278 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 MAGT1Q9H0U3 335 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 ZNF257Q9Y2Q1 563 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 JMJD1CQ15652 2540 aa17.04■□□□□ 0.32
TPM1-204ENST00000334895 IGHV7-81A0A0B4J1V7 117 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 SMLR1H3BR10 107 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 MAS1LP35410 378 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 COMPP49747 757 aaPredicted RBP17.03■□□□□ 0.32
TPM1-204ENST00000334895 HSPE1P61604 102 aaKnown RBP17.03■□□□□ 0.32
TPM1-204ENST00000334895 GNB1P62873 340 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 LRRC37A5PQ49AS3 106 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 PDLIM3Q53GG5 364 aaPredicted RBP17.03■□□□□ 0.32
TPM1-204ENST00000334895 OR52E5Q8NH55 327 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 RCL1Q9Y2P8 373 aaKnown RBP17.03■□□□□ 0.32
TPM1-204ENST00000334895 TRAV14DV4A0A0A6YYC5 116 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 FAM90A26D6RGX4 464 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 K7EPK0 472 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 POLR2GP62487 172 aaKnown RBP eCLIP17.03■□□□□ 0.32
TPM1-204ENST00000334895 BLCAPP62952 87 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 CX3CL1P78423 397 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 OR2T35Q8NGX2 323 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 OR5B3Q8NH48 314 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 COMMD5Q9GZQ3 224 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 FKBP11Q9NYL4 201 aa17.03■□□□□ 0.32
TPM1-204ENST00000334895 H0YIZ8 118 aa17.02■□□□□ 0.31
TPM1-204ENST00000334895 M0QZK8 103 aa17.02■□□□□ 0.31
TPM1-204ENST00000334895 IFNA17P01571 189 aa17.02■□□□□ 0.31
TPM1-204ENST00000334895 HILS1P60008 231 aa17.02■□□□□ 0.31
TPM1-204ENST00000334895 ZNF562Q6V9R5 426 aa17.02■□□□□ 0.31
TPM1-204ENST00000334895 Q6ZS46 218 aa17.02■□□□□ 0.31
TPM1-204ENST00000334895 RBKSQ9H477 322 aa17.02■□□□□ 0.31
TPM1-204ENST00000334895 NDUFA4L2Q9NRX3 87 aa17.02■□□□□ 0.31
TPM1-204ENST00000334895 CLDN34H7C241 214 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 GPR137BO60478 399 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 MPC2O95563 127 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 S100A10P60903 97 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 SPCS3P61009 180 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 PRCDQ00LT1 54 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 FXYD3Q14802 87 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 TCTE3Q8IZS6 198 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 OR1L8Q8NGR8 309 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 ZNF418Q8TF45 676 aaPredicted RBP17.01■□□□□ 0.31
TPM1-204ENST00000334895 SRSF12Q8WXF0 261 aaKnown RBP17.01■□□□□ 0.31
TPM1-204ENST00000334895 FBXO7Q9Y3I1 522 aa17.01■□□□□ 0.31
TPM1-204ENST00000334895 LSM5Q9Y4Y9 91 aaKnown RBP17.01■□□□□ 0.31
TPM1-204ENST00000334895 LINC01548A6NM66 108 aa17■□□□□ 0.31
TPM1-204ENST00000334895 ACTL6BO94805 426 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms