RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 WDR54Q9H977 334 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 NKX2-8O15522 239 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 IFITM1P13164 125 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 PNLIPP16233 465 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 KIAA0040Q15053 153 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 PDFQ9HBH1 243 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 PCNX3Q9H6A9 2034 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 LTBP4Q8N2S1 1624 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 K7ESM1 405 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 SAA1P0DJI8 122 aaPredicted RBP8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 PRSS12P56730 875 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 LILRA3Q8N6C8 439 aaPredicted RBP8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 SLC37A2Q8TED4 501 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 SFXN3Q9BWM7 321 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 SDF2L1Q9HCN8 221 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 V9GYY9 64 aa8.96□□□□□ -0.98
SPTBN1-201ENST00000333896 LINC01549A6NIU2 74 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 ZP1P60852 638 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 TGIF1Q15583 401 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 PLXNA4Q9HCM2 1894 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 C5orf66Q9H5L9 145 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 PAPPAQ13219 1627 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 LSM6P62312 80 aaKnown RBP8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 KIAA1644Q3SXP7 199 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 ATP5L2Q7Z4Y8 100 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 OR4A5Q8NH83 315 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 SH3BGRL3Q9H299 93 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 SMPXQ9UHP9 88 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 C1QL1O75973 258 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 MRPS11P82912 194 aaKnown RBP8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 TMEM252Q8N6L7 170 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 FOXB1Q99853 325 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 C1RLQ9NZP8 487 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 FOXL1Q12952 345 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM53BQ14153 422 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 KIRREL2Q6UWL6 708 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 LIMS2Q7Z4I7 341 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 SLC25A10Q9UBX3 287 aaPredicted RBP8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 PXMP4Q9Y6I8 212 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 SOX8P57073 446 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 CXXC4Q9H2H0 198 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 SHISA8B8ZZ34 492 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 SEMA5BQ9P283 1151 aa8.95□□□□□ -0.98
SPTBN1-201ENST00000333896 TRAV38-1A0A0B4J264 116 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 SSTR5P35346 364 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 CADM4Q8NFZ8 388 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 OR4D11Q8NGI4 311 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 CHTOPQ9Y3Y2 248 aaKnown RBP8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 TRAV1-1A0A0B4J248 108 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 MRPL20Q9BYC9 149 aaKnown RBP8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 HOXA3O43365 443 aaPredicted RBP8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 RNPS1Q15287 305 aaKnown RBP8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 VKORC1L1Q8N0U8 176 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 CEACAM18A8MTB9 384 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 PSG2P11465 335 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 SLC25A40Q8TBP6 338 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 ZNF479Q96JC4 524 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 TOMM7Q9P0U1 55 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 TMEM56-RWDD3S4R434 201 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 C2orf16Q68DN1 1984 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 IZUMO1RA6ND01 250 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 CD300EQ496F6 205 aaPredicted RBP8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 IGKV3D-20A0A0C4DH25 116 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 WNT9BO14905 357 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 HYPMO75409 117 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 ZGLP1P0C6A0 271 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 UCP3P55916 312 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 OVOL2Q9BRP0 275 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 KCNE1BA0A087WTH5 132 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 TRAV5A0A0B4J249 113 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 MALP21145 153 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 MPZP25189 248 aa8.94□□□□□ -0.98
SPTBN1-201ENST00000333896 TRBV5-5A0A0J9YX44 114 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A27PA6NNH2 459 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 RAMP1O60894 148 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 PGLYRP3Q96LB9 341 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 TRBV20OR9-2A0A075B6H5 130 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 A0A0U1RQV5 110 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM78AQ5JUQ0 283 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FOXF1Q12946 379 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 ASCL5Q7RTU5 278 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 HCFC2Q9Y5Z7 792 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 ID4P47928 161 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 KIR3DL3Q8N743 410 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 SRSF12Q8WXF0 261 aaKnown RBP8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 DHHO43323 396 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 NXT2Q9NPJ8 142 aaKnown RBP8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 LAMTOR3Q9UHA4 124 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 H3BRM9 83 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 C6orf106Q9H6K1 298 aaPredicted RBP8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 TRAV8-1A0A0A6YYK1 113 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A10PA6NDY2 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A18PA6NE21 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A16PA6NEW6 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A20PA6NIJ5 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A8PA6NJQ4 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A7PA6NKC0 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A22PA8MWA6 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A12PA8MX19 464 aa8.93□□□□□ -0.98
SPTBN1-201ENST00000333896 FAM90A5PA8MXJ8 464 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms