RNA–Protein interactions for RNA: ENST00000329078.7

SPNS2-201, Transcript of sphingolipid transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS2, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-201ENST00000329078 ATOH7Q8N100 152 aa16.56■□□□□ 0.24
SPNS2-201ENST00000329078 PINX1Q96BK5 328 aaKnown RBP16.56■□□□□ 0.24
SPNS2-201ENST00000329078 CTDSP1Q9GZU7 261 aa16.56■□□□□ 0.24
SPNS2-201ENST00000329078 TRAV3A0A0B4J244 114 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 CDKN1AP38936 164 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 ERVK-16P61578 105 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 KCNIP4Q6PIL6 250 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 CXXC4Q9H2H0 198 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 RYDENQ9NUL5 291 aaKnown RBP16.55■□□□□ 0.24
SPNS2-201ENST00000329078 CDC34P49427 236 aaPredicted RBP16.55■□□□□ 0.24
SPNS2-201ENST00000329078 SERF2P84101 59 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 TMEM170AQ8WVE7 144 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 FAM122AQ96E09 287 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 OR6C3Q9NZP0 311 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 C19orf67A6NJJ6 358 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 SLC17A3O00476 420 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 LINC00614P0C842 121 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 CMTM2Q8TAZ6 248 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 WNK2Q9Y3S1 2297 aa16.55■□□□□ 0.24
SPNS2-201ENST00000329078 TLN1Q9Y490 2541 aaKnown RBP16.55■□□□□ 0.24
SPNS2-201ENST00000329078 OR9G9P0C7N8 305 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 ZNF146Q15072 292 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 SPRNQ5BIV9 151 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 UTF1Q5T230 341 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 C1orf185Q5T7R7 199 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 MIC13Q5XKP0 118 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 ZCCHC24Q8N2G6 241 aaKnown RBP16.54■□□□□ 0.24
SPNS2-201ENST00000329078 ZNF114Q8NC26 417 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 HINT1P49773 126 aaPredicted RBP16.54■□□□□ 0.24
SPNS2-201ENST00000329078 ASPHD1Q5U4P2 390 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 Q6ZT83 130 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 LYG1Q8N1E2 194 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 RPRMLQ8N4K4 120 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 NPCDR1Q9BY65 106 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 F2Z2F3 143 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.54■□□□□ 0.24
SPNS2-201ENST00000329078 FRMD6-AS1P0C7T7 363 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 WT1P19544 449 aaPredicted RBP16.54■□□□□ 0.24
SPNS2-201ENST00000329078 GP6Q9HCN6 339 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 ZNRD1Q9P1U0 126 aa16.54■□□□□ 0.24
SPNS2-201ENST00000329078 KIR2DL2P43627 348 aaPredicted RBP16.53■□□□□ 0.24
SPNS2-201ENST00000329078 ERVK11-1P61568 191 aa16.53■□□□□ 0.24
SPNS2-201ENST00000329078 COL5A1-AS1Q5SY13 56 aa16.53■□□□□ 0.24
SPNS2-201ENST00000329078 GBGT1Q8N5D6 347 aa16.53■□□□□ 0.24
SPNS2-201ENST00000329078 OR2V2Q96R30 315 aa16.53■□□□□ 0.24
SPNS2-201ENST00000329078 VAMP8Q9BV40 100 aa16.53■□□□□ 0.24
SPNS2-201ENST00000329078 GCM1Q9NP62 436 aa16.53■□□□□ 0.24
SPNS2-201ENST00000329078 PROCRQ9UNN8 238 aa16.53■□□□□ 0.24
SPNS2-201ENST00000329078 SS18L1O75177 396 aaPredicted RBP16.52■□□□□ 0.24
SPNS2-201ENST00000329078 CLDN14O95500 239 aa16.52■□□□□ 0.24
SPNS2-201ENST00000329078 INO80CQ6PI98 192 aaPredicted RBP16.52■□□□□ 0.24
SPNS2-201ENST00000329078 CD177Q8N6Q3 437 aa16.52■□□□□ 0.24
SPNS2-201ENST00000329078 RND1Q92730 232 aa16.52■□□□□ 0.24
SPNS2-201ENST00000329078 SRSF7Q16629 238 aaKnown RBP eCLIP16.52■□□□□ 0.24
SPNS2-201ENST00000329078 DUX4L9Q6RFH8 374 aaPredicted RBP16.52■□□□□ 0.24
SPNS2-201ENST00000329078 S1PR3Q99500 378 aa16.52■□□□□ 0.24
SPNS2-201ENST00000329078 TMEM242Q9NWH2 141 aa16.52■□□□□ 0.24
SPNS2-201ENST00000329078 CTXND1A0A1B0GTU2 59 aa16.52■□□□□ 0.23
SPNS2-201ENST00000329078 IGHV3-48P01763 117 aa16.52■□□□□ 0.23
SPNS2-201ENST00000329078 PMCHP20382 165 aa16.52■□□□□ 0.23
SPNS2-201ENST00000329078 ADMP35318 185 aa16.52■□□□□ 0.23
SPNS2-201ENST00000329078 TCL1AP56279 114 aa16.52■□□□□ 0.23
SPNS2-201ENST00000329078 ZNF90Q03938 601 aa16.52■□□□□ 0.23
SPNS2-201ENST00000329078 ACOT6Q3I5F7 207 aaPredicted RBP16.52■□□□□ 0.23
SPNS2-201ENST00000329078 ALKBH7Q9BT30 221 aaPredicted RBP16.52■□□□□ 0.23
SPNS2-201ENST00000329078 HCFC1P51610 2035 aa16.52■□□□□ 0.23
SPNS2-201ENST00000329078 IQCF6A8MYZ5 107 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 RRHO14718 337 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 MBNL3Q9NUK0 354 aaKnown RBP16.51■□□□□ 0.23
SPNS2-201ENST00000329078 WIPI2Q9Y4P8 454 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 M0QZK8 103 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 GGCTO75223 188 aaKnown RBP16.51■□□□□ 0.23
SPNS2-201ENST00000329078 CD1BP29016 333 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 BRS3P32247 399 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 RNASEH2CQ8TDP1 164 aaKnown RBP16.51■□□□□ 0.23
SPNS2-201ENST00000329078 NEIL1Q96FI4 390 aaPredicted RBP16.51■□□□□ 0.23
SPNS2-201ENST00000329078 HIPK2Q9H2X6 1198 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 SMIM15Q7Z3B0 74 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 ENY2Q9NPA8 101 aa16.51■□□□□ 0.23
SPNS2-201ENST00000329078 TRBV6-6A0A0A6YYG2 114 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 PIGBOS1A0A0B4J2F0 54 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 OR5G3P0C626 314 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 NPPCP23582 126 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 OR10J1P30954 320 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 ACY3Q96HD9 319 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 PSMG3Q9BT73 122 aaPredicted RBP16.5■□□□□ 0.23
SPNS2-201ENST00000329078 C17orf112F2Z3M2 114 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 NTF3P20783 257 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 KITLGP21583 273 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 TMEM14EPQ6UXP3 125 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 C11orf53Q8IXP5 236 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 SARAFQ96BY9 339 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 HSPB7Q9UBY9 170 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 BRWD1-AS2P59051 145 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 ITLN1Q8WWA0 313 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 MBD3L1Q8WWY6 194 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 SNRNP40Q96DI7 357 aaKnown RBP16.5■□□□□ 0.23
SPNS2-201ENST00000329078 TAAR6Q96RI8 345 aa16.5■□□□□ 0.23
SPNS2-201ENST00000329078 SPENQ96T58 3664 aaKnown RBP16.49■□□□□ 0.23
SPNS2-201ENST00000329078 TACC2O95359 2948 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms