RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TMEM150CB9EJG8 249 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 RPS18P62269 152 aaKnown RBP9.93□□□□□ -0.82
SHMT2-201ENST00000328923 KIR3DS1Q14943 382 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 FOXI2Q6ZQN5 318 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 ZDHHC23Q8IYP9 409 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 ZNF418Q8TF45 676 aaPredicted RBP9.93□□□□□ -0.82
SHMT2-201ENST00000328923 GALMQ96C23 342 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 ALKBH4Q9NXW9 302 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 KCNIP1Q9NZI2 227 aa9.93□□□□□ -0.82
SHMT2-201ENST00000328923 SDK1Q7Z5N4 2213 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 IGKV3D-11A0A0A0MRZ8 115 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 MT-ND6P03923 174 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 FAM87AP0C7U9 286 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 C1orf61Q13536 156 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 HLA-DQA1Q5Y7H0 255 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 OR2T6Q8NHC8 308 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 DPF1Q92782 380 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 ERG28Q9UKR5 140 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 IGHV1OR15-9A0A0B4J2B8 117 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 VWC2LB2RUY7 222 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 SSBP2P81877 361 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-201ENST00000328923 RNASEKQ6P5S7 137 aaKnown RBP9.92□□□□□ -0.82
SHMT2-201ENST00000328923 ACP7Q6ZNF0 438 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 CLDN23Q96B33 292 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 SPAG8Q99932 426 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-201ENST00000328923 MCRIP2Q9BUT9 160 aaKnown RBP9.92□□□□□ -0.82
SHMT2-201ENST00000328923 PSENENQ9NZ42 101 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 IL36GQ9NZH8 169 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 B4GALT7Q9UBV7 327 aa9.92□□□□□ -0.82
SHMT2-201ENST00000328923 CA1P00915 261 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-201ENST00000328923 SUMO3P55854 103 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-201ENST00000328923 HHEXQ03014 270 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 LINC00173Q6ZV60 143 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 FA2HQ7L5A8 372 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 RALGAPA1Q6GYQ0 2036 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 PCDH15Q96QU1 1955 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 SCO2A0A1W2PP80 73 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 SH2D7A6NKC9 451 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-201ENST00000328923 DHRS3O75911 302 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 PPYP01298 95 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 ARL3P36405 182 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 ATP5J2P56134 94 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 TCL1AP56279 114 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 HBG1P69891 147 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 HBG2P69892 147 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 AESQ08117 197 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 OR8B8Q15620 311 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 TPRX1Q8N7U7 411 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 LSM10Q969L4 123 aaKnown RBP9.91□□□□□ -0.82
SHMT2-201ENST00000328923 RAB40CQ96S21 281 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 MS4A5Q9H3V2 200 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-201ENST00000328923 MBNL3Q9NUK0 354 aaKnown RBP9.91□□□□□ -0.82
SHMT2-201ENST00000328923 TMEM140Q9NV12 185 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 UFC1Q9Y3C8 167 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 NCOA6Q14686 2063 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-201ENST00000328923 CACNA1HO95180 2353 aa9.91□□□□□ -0.82
SHMT2-201ENST00000328923 LIPT2A6NK58 231 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 NEURL1O76050 574 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 IGHG1P01857 330 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 FCGR2AP12318 317 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 CLRN1P58418 232 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 GAGE5Q13069 117 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 GAGE6Q13070 117 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 SLC35E4Q6ICL7 350 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 SLC25A47Q6Q0C1 308 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 DEFB119Q8N690 84 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 ZNF441Q8N8Z8 693 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 GPR82Q96P67 336 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 TECRQ9NZ01 308 aaKnown RBP9.9□□□□□ -0.82
SHMT2-201ENST00000328923 TRAPPC2LQ9UL33 140 aa9.9□□□□□ -0.82
SHMT2-201ENST00000328923 A6NDN8 102 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 J3QR89 54 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 CFHR2P36980 270 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 TRIP6Q15654 476 aaKnown RBP9.9□□□□□ -0.83
SHMT2-201ENST00000328923 DOLPP1Q86YN1 238 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 BPIFA4PQ86YQ2 179 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 TMEM251Q8N6I4 163 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 RDH5Q92781 318 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 LYZL4Q96KX0 146 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 SRSF8Q9BRL6 282 aaKnown RBP9.9□□□□□ -0.83
SHMT2-201ENST00000328923 KCNIP2Q9NS61 270 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 V9GYV3 84 aa9.9□□□□□ -0.83
SHMT2-201ENST00000328923 LOC102723996A0A087X1L8 192 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 APCSP02743 223 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
SHMT2-201ENST00000328923 FABP2P12104 132 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 CX3CL1P78423 397 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 SPANXN5Q5MJ07 72 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 ZNF818PQ6ZRF7 136 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 SHISA6Q6ZSJ9 500 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 HARBI1Q96MB7 349 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 KMT2EQ8IZD2 1858 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 RTTNQ86VV8 2226 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 SLC38A11Q08AI6 406 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 WFDC2Q14508 124 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 SH2D6Q7Z4S9 175 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 GAPTQ8N292 157 aa9.89□□□□□ -0.83
SHMT2-201ENST00000328923 EMC6Q9BV81 110 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms