RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 FAM159AQ6UWV7 190 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 KCNK17Q96T54 332 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 SPINT1O43278 529 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 AMBPP02760 352 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 TSPOP30536 169 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 LY6EQ16553 131 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 ZNF479Q96JC4 524 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 CCL20P78556 96 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 SPEM2Q0P670 501 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 GAGE2BQ13066 116 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 GAGE2EQ4V326 116 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 SPEM1Q8N4L4 309 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 GAGE2DQ9UEU5 116 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 IGHV1OR15-9A0A0B4J2B8 117 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 FOXS1O43638 330 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 YBX2Q9Y2T7 364 aaKnown RBP13.99□□□□□ -0.17
SMAD3-201ENST00000327367 HIST1H4AP62805 103 aaKnown RBP13.99□□□□□ -0.17
SMAD3-201ENST00000327367 GCSAMQ8N6F7 178 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 DUX5Q96PT3 197 aa13.99□□□□□ -0.17
SMAD3-201ENST00000327367 TRAV8-1A0A0A6YYK1 113 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-201ENST00000327367 WNT9BO14905 357 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 TMEM249Q2WGJ8 235 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 COQ2Q96H96 371 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 FXYD7P58549 80 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 FAM71F2Q6NXP2 309 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 LHFPL4Q7Z7J7 247 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 LRTM2Q8N967 370 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 NPIPB4C9JG80 1138 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 HOXC4P09017 264 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-201ENST00000327367 PRR7Q8TB68 274 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 TTTY12Q9BZ98 90 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 IGHV3OR16-10A0A075B7F0 116 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 A8MWV9 139 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 TFF2Q03403 129 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 HEPN1Q6WQI6 88 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 ANKRD33Q7Z3H0 272 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 TEX45Q8NA69 505 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 LOXL4Q96JB6 756 aa13.98□□□□□ -0.17
SMAD3-201ENST00000327367 OTOFQ9HC10 1997 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 ODAMA1E959 279 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 SLC25A47Q6Q0C1 308 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 A0A1W2PS18 150 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 CEACAM4O75871 244 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 NBEAP1P0C6P0 100 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 ESDP10768 282 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 FOXL1Q12952 345 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 UBALD2Q8IYN6 164 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 CYSLTR1Q9Y271 337 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 A0A087X0K7 114 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 IGKV1-8A0A0C4DH67 115 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 RNASE4P34096 147 aaKnown RBP13.97□□□□□ -0.17
SMAD3-201ENST00000327367 TRA2AQ13595 282 aaKnown RBP eCLIP13.97□□□□□ -0.17
SMAD3-201ENST00000327367 ZNF48Q96MX3 618 aaPredicted RBP13.97□□□□□ -0.17
SMAD3-201ENST00000327367 RNF126Q9BV68 326 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 AKAP11Q9UKA4 1901 aa13.97□□□□□ -0.17
SMAD3-201ENST00000327367 BTCP35070 178 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 ZNF146Q15072 292 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 CCDC144NLQ6NUI1 221 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 TNFRSF18Q9Y5U5 241 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 hDV102S1A0JD36 115 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 ZNF815PA8K554 130 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 TMEM14DPA8MWL7 114 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 WISP3O95389 354 aaPredicted RBP13.96□□□□□ -0.17
SMAD3-201ENST00000327367 MC5RP33032 325 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 TJP1Q07157 1748 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 OR4X2Q8NGF9 303 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 FOXD3Q9UJU5 478 aaPredicted RBP13.96□□□□□ -0.17
SMAD3-201ENST00000327367 GPX4P36969 197 aaPredicted RBP13.96□□□□□ -0.17
SMAD3-201ENST00000327367 CA7P43166 264 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 C9orf50Q5SZB4 431 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 GZMBP10144 247 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 ZNF658BQ4V348 819 aaPredicted RBP13.96□□□□□ -0.17
SMAD3-201ENST00000327367 ORMDL3Q8N138 153 aa13.96□□□□□ -0.17
SMAD3-201ENST00000327367 FAM106CPP0CH98 169 aa13.96□□□□□ -0.18
SMAD3-201ENST00000327367 PPIFP30405 207 aaKnown RBP13.96□□□□□ -0.18
SMAD3-201ENST00000327367 SRSF6Q13247 344 aaKnown RBP13.96□□□□□ -0.18
SMAD3-201ENST00000327367 DCAF10Q5QP82 559 aa13.96□□□□□ -0.18
SMAD3-201ENST00000327367 OR10W1Q8NGF6 305 aa13.96□□□□□ -0.18
SMAD3-201ENST00000327367 C2orf88Q9BSF0 95 aa13.96□□□□□ -0.18
SMAD3-201ENST00000327367 DEPPQ9NTK1 212 aa13.96□□□□□ -0.18
SMAD3-201ENST00000327367 CD55P08174 381 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 LCNL1Q6ZST4 164 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 MIA3Q5JRA6 1907 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 CNTFRP26992 372 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 ATP5G2Q06055 141 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 COX11Q9Y6N1 276 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 SCN1AP35498 2009 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 APOBEC4Q8WW27 367 aaKnown RBP13.95□□□□□ -0.18
SMAD3-201ENST00000327367 REPIN1Q9BWE0 567 aaKnown RBP13.95□□□□□ -0.18
SMAD3-201ENST00000327367 FOXA2Q9Y261 457 aaPredicted RBP13.95□□□□□ -0.18
SMAD3-201ENST00000327367 A0A0G2JLM5 398 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 IGHV5-10-1A0A0J9YXX1 117 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 C17orf98A8MV24 154 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 TUBA4BQ9H853 241 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 EPDR1Q9UM22 224 aa13.95□□□□□ -0.18
SMAD3-201ENST00000327367 TNFSF13O75888 250 aa13.94□□□□□ -0.18
SMAD3-201ENST00000327367 GTSCR1Q86UQ5 136 aa13.94□□□□□ -0.18
SMAD3-201ENST00000327367 FER1L6-AS1Q8NA97 138 aa13.94□□□□□ -0.18
SMAD3-201ENST00000327367 WFDC1Q9HC57 220 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms