RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 FNDC10F2Z333 226 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 CGAP01215 116 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 LHBP01229 141 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 RPL29P47914 159 aaKnown RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 RAB7AP51149 207 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 SELENOTP62341 195 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 PRR20EP86478 221 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 PRR20CP86479 221 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 PRR20DP86480 221 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 PRR20BP86481 221 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 PRR20AP86496 221 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 EFNB3Q15768 340 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 POU2AF1Q16633 256 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 MRPL41Q8IXM3 137 aaKnown RBP7.17□□□□□ -1.26
CLK1-201ENST00000321356 OCC1Q8TAD7 63 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 FAM234AQ9H0X4 552 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 SLC25A15Q9Y619 301 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 LY96Q9Y6Y9 160 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 ARL2-SNX15V9GYD0 113 aa7.17□□□□□ -1.26
CLK1-201ENST00000321356 K7EN84 100 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 IGHV3-13P01766 116 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 OR4A8P0C604 315 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 AREGP15514 252 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 NPY1RP25929 384 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 HSPE1P61604 102 aaKnown RBP7.16□□□□□ -1.26
CLK1-201ENST00000321356 RHOBP62745 196 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 RPL31P62899 125 aaKnown RBP7.16□□□□□ -1.26
CLK1-201ENST00000321356 C17orf58Q2M2W7 97 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 UTF1Q5T230 341 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 SPATA31B1PQ5VZV4 182 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 OR4A47Q6IF82 309 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 TEPPQ6URK8 271 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 BHLHA15Q7RTS1 189 aaPredicted RBP7.16□□□□□ -1.26
CLK1-201ENST00000321356 LRP11Q86VZ4 500 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 TMEM256Q8N2U0 113 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 STPG3Q8N7X2 389 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 ZNRF1Q8ND25 227 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 SLC24A4Q8NFF2 622 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 FDCSPQ8NFU4 85 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 OR10G8Q8NGN5 311 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 SSMEM1Q8WWF3 244 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 SARAFQ96BY9 339 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 STARD4Q96DR4 205 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 SDSLQ96GA7 329 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 SFXN3Q9BWM7 321 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 SEPSECSQ9HD40 501 aaKnown RBP7.16□□□□□ -1.26
CLK1-201ENST00000321356 DKK4Q9UBT3 224 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 TANC2Q9HCD6 1990 aa7.16□□□□□ -1.26
CLK1-201ENST00000321356 DSCAMO60469 2012 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 IGHV3OR15-7A0A075B7D8 119 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 SAA2-SAA4A0A096LPE2 208 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 KIR2DL5BA0A0G2JN68 375 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 KIR2DL5BA0A0G2JPC4 375 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 A0A1B0GUS0 222 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 NKX2-8O15522 239 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 NUPR1O60356 82 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 IGHV3-7P01780 117 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 RNF224P0DH78 156 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 SAA2P0DJI9 122 aaPredicted RBP7.15□□□□□ -1.26
CLK1-201ENST00000321356 ESDP10768 282 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 NDUFB7P17568 137 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 ADMP35318 185 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 THBS3P49746 956 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 SPRNQ5BIV9 151 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 CT45A1Q5HYN5 189 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 TCF23Q7RTU1 214 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 KIR2DL5AQ8N109 375 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 ZNF439Q8NDP4 499 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 CT45A3Q8NHU0 189 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 NEUROG1Q92886 237 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 OR2V2Q96R30 315 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 FKBP11Q9NYL4 201 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 IL36BQ9NZH7 164 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 LOC400499M0QZD8 3231 aa7.15□□□□□ -1.26
CLK1-201ENST00000321356 TRGV10A0A0A0MS01 117 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 TRAV17A0A0B4J275 112 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 KBTBD11-OT1A0A1B0GTJ5 212 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 AHRRA9YTQ3 701 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 CA2P00918 260 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 SNRPCP09234 159 aaKnown RBP7.15□□□□□ -1.27
CLK1-201ENST00000321356 LINC00869P0C866 280 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 CCL11P51671 97 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 LINC00310P59036 64 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 RAB31Q13636 194 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 HLA-DRB5Q30154 266 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 C1orf194Q5T5A4 169 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 MOGAT3Q86VF5 341 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 DMRTC2Q8IXT2 367 aaPredicted RBP7.15□□□□□ -1.27
CLK1-201ENST00000321356 FAM222BQ8WU58 562 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 ADTRPQ96IZ2 230 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 WFIKKN1Q96NZ8 548 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 LINC00574Q9H8X3 128 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 RAB9BQ9NP90 201 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 IDI2-AS1Q9NZ38 188 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 SLC25A10Q9UBX3 287 aaPredicted RBP7.15□□□□□ -1.27
CLK1-201ENST00000321356 TP53TG3Q9ULZ0 132 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 PROCRQ9UNN8 238 aa7.15□□□□□ -1.27
CLK1-201ENST00000321356 FOXH1O75593 365 aa7.14□□□□□ -1.27
CLK1-201ENST00000321356 MT-CO2P00403 227 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms