RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 SPINK9Q5DT21 86 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 TPTE2P1Q5T6R2 138 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 TAF15Q92804 592 aaKnown RBP eCLIP14.41□□□□□ -0.1
RAB39A-201ENST00000320578 OOSP1A8MZH6 123 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 COX6B1P14854 86 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 TMEM182Q6ZP80 229 aaPredicted RBP14.41□□□□□ -0.1
RAB39A-201ENST00000320578 THNSL2Q86YJ6 484 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 OR1L8Q8NGR8 309 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 PIMREGQ9BSJ6 248 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 SIRPDQ9H106 197 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 PLEKHA3Q9HB20 300 aa14.41□□□□□ -0.1
RAB39A-201ENST00000320578 PRH1P02810 166 aa14.4□□□□□ -0.1
RAB39A-201ENST00000320578 HABP2Q14520 560 aaPredicted RBP14.4□□□□□ -0.1
RAB39A-201ENST00000320578 MINOS1Q5TGZ0 78 aa14.4□□□□□ -0.1
RAB39A-201ENST00000320578 HRH4Q9H3N8 390 aa14.4□□□□□ -0.1
RAB39A-201ENST00000320578 NDUFA4L2Q9NRX3 87 aa14.4□□□□□ -0.1
RAB39A-201ENST00000320578 MINOS1-NBL1R4GNA1 71 aa14.4□□□□□ -0.1
RAB39A-201ENST00000320578 ZFYVE26Q68DK2 2539 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 ZNF462Q96JM2 2506 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 A0A1W2PPI3 338 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 VWC2LB2RUY7 222 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 PRSS46E5RG02 174 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 FNDC10F2Z333 226 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 SOX15O60248 233 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 CD1BP29016 333 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 DLK1P80370 383 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 RUNX1Q01196 453 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 AKR1C8PQ5T2L2 129 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 SP5Q6BEB4 398 aaPredicted RBP14.39□□□□□ -0.11
RAB39A-201ENST00000320578 ETV3LQ6ZN32 361 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 SLC24A4Q8NFF2 622 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 C10orf105Q8TEF2 133 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 FAM168AQ92567 244 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 COMMD5Q9GZQ3 224 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 SIRT7Q9NRC8 400 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 USP9XQ93008 2570 aaPredicted RBP14.39□□□□□ -0.11
RAB39A-201ENST00000320578 LRBAP50851 2863 aa14.39□□□□□ -0.11
RAB39A-201ENST00000320578 A0A1W2PN81 502 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 CRYGBP07316 175 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 NPY1RP25929 384 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 MAS1LP35410 378 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 CHRNA7P36544 502 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 DLX1P56177 255 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 BSXQ3C1V8 233 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 MOB3BQ86TA1 216 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 LFNGQ8NES3 379 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 BTBD17A6NE02 478 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 RRHO14718 337 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 MPDU1O75352 247 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 DSCR9P59020 149 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 VMO1Q7Z5L0 202 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 TMEM170AQ8WVE7 144 aa14.38□□□□□ -0.11
RAB39A-201ENST00000320578 EPG5Q9HCE0 2579 aa14.37□□□□□ -0.11
RAB39A-201ENST00000320578 UBE2L5PA0A1B0GUS4 154 aa14.37□□□□□ -0.11
RAB39A-201ENST00000320578 TSPAN15O95858 294 aa14.37□□□□□ -0.11
RAB39A-201ENST00000320578 C2orf83Q53S99 150 aa14.37□□□□□ -0.11
RAB39A-201ENST00000320578 CCDC144NLQ6NUI1 221 aa14.37□□□□□ -0.11
RAB39A-201ENST00000320578 CLEC2AQ6UVW9 174 aa14.37□□□□□ -0.11
RAB39A-201ENST00000320578 WDR83OSQ9Y284 106 aa14.37□□□□□ -0.11
RAB39A-201ENST00000320578 ATP5J2P56134 94 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 LCN2P80188 198 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 LDLRAD2Q5SZI1 272 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 MMD2Q8IY49 270 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 FAM213BQ8TBF2 198 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 TRAV1-1A0A0B4J248 108 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 HOXB4P17483 251 aaPredicted RBP14.36□□□□□ -0.11
RAB39A-201ENST00000320578 FHITP49789 147 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 ERHP84090 104 aaKnown RBP14.36□□□□□ -0.11
RAB39A-201ENST00000320578 ZNF616Q08AN1 781 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 PSG5Q15238 335 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 RSG1Q9BU20 258 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 ZNF430Q9H8G1 570 aaPredicted RBP14.36□□□□□ -0.11
RAB39A-201ENST00000320578 FBXO7Q9Y3I1 522 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 TBL2Q9Y4P3 447 aaKnown RBP14.36□□□□□ -0.11
RAB39A-201ENST00000320578 RFNGQ9Y644 331 aa14.36□□□□□ -0.11
RAB39A-201ENST00000320578 IGHV3-72A0A0B4J1Y9 119 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 A0A1B0GW64 132 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 RNASEK-C17orf49H0YIS7 233 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 SLC25A17O43808 307 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 CA2P00918 260 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 MBP02144 154 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 IFNA4P05014 189 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 MYOD1P15172 320 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 SNCAP37840 140 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 DVL1P1P54792 670 aaPredicted RBP14.35□□□□□ -0.11
RAB39A-201ENST00000320578 MRGPRG-AS1Q2M3A8 158 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 MRPL41Q8IXM3 137 aaKnown RBP14.35□□□□□ -0.11
RAB39A-201ENST00000320578 CFHR4Q92496 578 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 RITA1Q96K30 269 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 LINC00052Q96N35 136 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 FLNCQ14315 2725 aa14.35□□□□□ -0.11
RAB39A-201ENST00000320578 C17orf112F2Z3M2 114 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 TOX4O94842 621 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 HBE1P02100 147 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 CD5P06127 495 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 FGF7P21781 194 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 UBE2E1P51965 193 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 PRB3Q04118 309 aaPredicted RBP14.34□□□□□ -0.11
RAB39A-201ENST00000320578 PRSS8Q16651 343 aa14.34□□□□□ -0.11
RAB39A-201ENST00000320578 BPIFCQ8NFQ6 507 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms