RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 MBD2Q9UBB5 411 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 RCL1Q9Y2P8 373 aaKnown RBP11.27□□□□□ -0.61
MSRA-201ENST00000317173 NSG2Q9Y328 171 aa11.27□□□□□ -0.61
MSRA-201ENST00000317173 LSM5Q9Y4Y9 91 aaKnown RBP11.27□□□□□ -0.61
MSRA-201ENST00000317173 TET2Q6N021 2002 aaPredicted RBP11.27□□□□□ -0.61
MSRA-201ENST00000317173 H0YIZ8 118 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 NBR2O15453 112 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 SYNGR2O43760 224 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 SLC25A17O43808 307 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 TMEM11P17152 192 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 SPCS3P61009 180 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 POLR2GP62487 172 aaKnown RBP eCLIP11.26□□□□□ -0.61
MSRA-201ENST00000317173 RPL8P62917 257 aaKnown RBP11.26□□□□□ -0.61
MSRA-201ENST00000317173 LRRC75BQ2VPJ9 315 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 ZNF546Q86UE3 836 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 MMD2Q8IY49 270 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 SIGLEC9Q9Y336 463 aa11.26□□□□□ -0.61
MSRA-201ENST00000317173 FXYD6-FXYD2A0A087WZ82 144 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 TRAV3A0A0B4J244 114 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 RRHO14718 337 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 GPR137BO60478 399 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 MAS1LP35410 378 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 TAS2R30P59541 319 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 OR2B8PP59922 312 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 HSPE1P61604 102 aaKnown RBP11.25□□□□□ -0.61
MSRA-201ENST00000317173 MMDQ15546 238 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 PPP1R27Q86WC6 154 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 DCUN1D4Q92564 292 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 RITA1Q96K30 269 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 CIB3Q96Q77 187 aaPredicted RBP11.25□□□□□ -0.61
MSRA-201ENST00000317173 QTRT1Q9BXR0 403 aaKnown RBP11.25□□□□□ -0.61
MSRA-201ENST00000317173 OR5AC2Q9NZP5 309 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 METTL1Q9UBP6 276 aaKnown RBP11.25□□□□□ -0.61
MSRA-201ENST00000317173 TNFSF18Q9UNG2 199 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 WSB1Q9Y6I7 421 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 L7N2F9 121 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 IFNA17P01571 189 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 PAX6P26367 422 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 NUP62P37198 522 aaPredicted RBP11.25□□□□□ -0.61
MSRA-201ENST00000317173 P2RY1P47900 373 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 VAMP2P63027 116 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 ZNF345Q14585 488 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 INO80EQ8NBZ0 244 aaPredicted RBP11.25□□□□□ -0.61
MSRA-201ENST00000317173 COMMD5Q9GZQ3 224 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 C11orf1Q9H5F2 150 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 OR51B2Q9Y5P1 312 aa11.25□□□□□ -0.61
MSRA-201ENST00000317173 TNCP24821 2201 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 ARPC5O15511 151 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 CHST1O43916 411 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 SSSCA1O60232 199 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 CNTFRP26992 372 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 RPL23AP62750 156 aaKnown RBP11.24□□□□□ -0.61
MSRA-201ENST00000317173 PRSS8Q16651 343 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 OR1L8Q8NGR8 309 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 TMEM158Q8WZ71 300 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 SMIM8Q96KF7 97 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 MDFIQ99750 246 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 SSX3Q99909 188 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 MAGT1Q9H0U3 335 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 RBKSQ9H477 322 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 ZNF430Q9H8G1 570 aaPredicted RBP11.24□□□□□ -0.61
MSRA-201ENST00000317173 PITPNC1Q9UKF7 332 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 TCF19Q9Y242 345 aa11.24□□□□□ -0.61
MSRA-201ENST00000317173 MXRA5Q9NR99 2828 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 TSC22D2O75157 780 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 ACTL6BO94805 426 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 OR2F2O95006 317 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 NXPH3O95157 252 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 C4BPBP20851 252 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 CD24P25063 80 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 F2RL1P55085 397 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 OR2F1Q13607 317 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 HNF4GQ14541 408 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 PLGLAQ15195 96 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 C5orf64Q2M2E5 130 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 ACOT7LQ6ZUV0 252 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 DTD1Q8TEA8 209 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 RBMXL1Q96E39 390 aaKnown RBP11.23□□□□□ -0.61
MSRA-201ENST00000317173 AQP10Q96PS8 301 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 MFFQ9GZY8 342 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 PRDM13Q9H4Q3 707 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
MSRA-201ENST00000317173 LYRM2Q9NU23 88 aaPredicted RBP11.23□□□□□ -0.61
MSRA-201ENST00000317173 COL6A5A8TX70 2615 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 A0A0D9SG52 128 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 INS-IGF2F8WCM5 200 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 SCAF4O95104 1147 aaKnown RBP11.22□□□□□ -0.61
MSRA-201ENST00000317173 NKX2-5P52952 324 aaPredicted RBP11.22□□□□□ -0.61
MSRA-201ENST00000317173 MRGPRG-AS1Q2M3A8 158 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 C16orf82Q7Z2V1 217 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 MRPL41Q8IXM3 137 aaKnown RBP11.22□□□□□ -0.61
MSRA-201ENST00000317173 C9orf62Q8N4C0 152 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 OR2C3Q8N628 320 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 GRPEL2Q8TAA5 225 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 PIFOQ8TCI5 191 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 RBM14Q96PK6 669 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms