RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 ACY3Q96HD9 319 aa16.09■□□□□ 0.17
AP3S1-201ENST00000316788 MS4A5Q9H3V2 200 aa16.09■□□□□ 0.17
AP3S1-201ENST00000316788 PXMP4Q9Y6I8 212 aa16.09■□□□□ 0.17
AP3S1-201ENST00000316788 ITPR1Q14643 2758 aa16.09■□□□□ 0.17
AP3S1-201ENST00000316788 SLC31A2O15432 143 aa16.08■□□□□ 0.17
AP3S1-201ENST00000316788 CEACAM8P31997 349 aaPredicted RBP16.08■□□□□ 0.17
AP3S1-201ENST00000316788 ATP5IP56385 69 aaPredicted RBP16.08■□□□□ 0.17
AP3S1-201ENST00000316788 SPRNQ5BIV9 151 aa16.08■□□□□ 0.17
AP3S1-201ENST00000316788 CISD2Q8N5K1 135 aaKnown RBP16.08■□□□□ 0.17
AP3S1-201ENST00000316788 TMEM204Q9BSN7 226 aa16.08■□□□□ 0.17
AP3S1-201ENST00000316788 NBEAQ8NFP9 2946 aa16.08■□□□□ 0.16
AP3S1-201ENST00000316788 SPRY3O43610 288 aa16.08■□□□□ 0.16
AP3S1-201ENST00000316788 CRYABP02511 175 aaKnown RBP16.08■□□□□ 0.16
AP3S1-201ENST00000316788 GNB1P62873 340 aa16.08■□□□□ 0.16
AP3S1-201ENST00000316788 LINC01551Q86U37 167 aa16.08■□□□□ 0.16
AP3S1-201ENST00000316788 LURAP1LQ8IV03 231 aa16.08■□□□□ 0.16
AP3S1-201ENST00000316788 OR2T10Q8NGZ9 312 aa16.08■□□□□ 0.16
AP3S1-201ENST00000316788 PRORYQ9H606 182 aa16.08■□□□□ 0.16
AP3S1-201ENST00000316788 IDI2-AS1Q9NZ38 188 aa16.08■□□□□ 0.16
AP3S1-201ENST00000316788 SAA2-SAA4A0A096LPE2 208 aa16.07■□□□□ 0.16
AP3S1-201ENST00000316788 TRAV3A0A0B4J244 114 aa16.07■□□□□ 0.16
AP3S1-201ENST00000316788 TRAV38-1A0A0B4J264 116 aa16.07■□□□□ 0.16
AP3S1-201ENST00000316788 IL6RP08887 468 aaPredicted RBP16.07■□□□□ 0.16
AP3S1-201ENST00000316788 SAA2P0DJI9 122 aaPredicted RBP16.07■□□□□ 0.16
AP3S1-201ENST00000316788 HIST1H1BP16401 226 aaKnown RBP16.07■□□□□ 0.16
AP3S1-201ENST00000316788 TNFSF4P23510 183 aa16.07■□□□□ 0.16
AP3S1-201ENST00000316788 GFI1BQ5VTD9 330 aa16.07■□□□□ 0.16
AP3S1-201ENST00000316788 RHOVQ96L33 236 aa16.07■□□□□ 0.16
AP3S1-201ENST00000316788 PRNDQ9UKY0 176 aa16.07■□□□□ 0.16
AP3S1-201ENST00000316788 ZNF257Q9Y2Q1 563 aa16.07■□□□□ 0.16
AP3S1-201ENST00000316788 NPY1RP25929 384 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 RPL29P47914 159 aaKnown RBP16.06■□□□□ 0.16
AP3S1-201ENST00000316788 PDLIM4P50479 330 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 MRPS11P82912 194 aaKnown RBP16.06■□□□□ 0.16
AP3S1-201ENST00000316788 TNFAIP6P98066 277 aaPredicted RBP16.06■□□□□ 0.16
AP3S1-201ENST00000316788 GCSAMLQ5JQS6 135 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 TEX36Q5VZQ5 186 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 OR4A47Q6IF82 309 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 ZNF788Q6ZQV5 615 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 SLC24A4Q8NFF2 622 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 NUP37Q8NFH4 326 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 RNASEH2CQ8TDP1 164 aaKnown RBP16.06■□□□□ 0.16
AP3S1-201ENST00000316788 GAFA1Q96PS6 74 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 PFDN5Q99471 154 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 GCM1Q9NP62 436 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 ARL2-SNX15V9GYD0 113 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 GTF3C1Q12789 2109 aa16.06■□□□□ 0.16
AP3S1-201ENST00000316788 IGHV1-46P01743 117 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 RAB31Q13636 194 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 ACTL10Q5JWF8 245 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 C1orf229Q6ZS94 237 aaPredicted RBP16.05■□□□□ 0.16
AP3S1-201ENST00000316788 VKORC1L1Q8N0U8 176 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 ABHD12Q8N2K0 398 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 ZNF383Q8NA42 475 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 PLPPR2Q96GM1 343 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 HIST1H2BLQ99880 126 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 ENY2Q9NPA8 101 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 FAM87AP0C7U9 286 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 ATP5G3P48201 142 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 KRTCAP3Q53RY4 240 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 MIC13Q5XKP0 118 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 TEPPQ6URK8 271 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 TCF23Q7RTU1 214 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 OR1P1Q8NH06 330 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 C1orf159Q96HA4 380 aa16.05■□□□□ 0.16
AP3S1-201ENST00000316788 PIEZO2Q9H5I5 2752 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 SMG1Q96Q15 3661 aaKnown RBP16.04■□□□□ 0.16
AP3S1-201ENST00000316788 DVL1O14640 695 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 ARL14EPLP0DKL9 152 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 RHOBP62745 196 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 FOXL1Q12952 345 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 C4orf17Q53FE4 359 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 NECAP1Q8NC96 275 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 OR5R1Q8NH85 324 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 ABHD17AQ96GS6 310 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 PACRGQ96M98 296 aaPredicted RBP16.04■□□□□ 0.16
AP3S1-201ENST00000316788 PCGF1Q9BSM1 259 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 ELOVL1Q9BW60 279 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 USF3Q68DE3 2245 aa16.04■□□□□ 0.16
AP3S1-201ENST00000316788 GATCO43716 136 aaKnown RBP16.03■□□□□ 0.16
AP3S1-201ENST00000316788 MT-CO2P00403 227 aa16.03■□□□□ 0.16
AP3S1-201ENST00000316788 DEFA4P12838 97 aa16.03■□□□□ 0.16
AP3S1-201ENST00000316788 FABP4P15090 132 aa16.03■□□□□ 0.16
AP3S1-201ENST00000316788 ARSJQ5FYB0 599 aaPredicted RBP16.03■□□□□ 0.16
AP3S1-201ENST00000316788 CST9LP1Q5W188 147 aa16.03■□□□□ 0.16
AP3S1-201ENST00000316788 SLC25A48Q6ZT89 311 aaKnown RBP16.03■□□□□ 0.16
AP3S1-201ENST00000316788 TMEM144Q7Z5S9 345 aa16.03■□□□□ 0.16
AP3S1-201ENST00000316788 FAM57AQ8TBR7 257 aa16.03■□□□□ 0.16
AP3S1-201ENST00000316788 NEUROG1Q92886 237 aa16.03■□□□□ 0.16
AP3S1-201ENST00000316788 C11orf52Q96A22 123 aa16.03■□□□□ 0.16
AP3S1-201ENST00000316788 PATZ1Q9HBE1 687 aaKnown RBP16.03■□□□□ 0.16
AP3S1-201ENST00000316788 RPUSD1Q9UJJ7 312 aaKnown RBP16.03■□□□□ 0.16
AP3S1-201ENST00000316788 A8MXE2 369 aa16.02■□□□□ 0.16
AP3S1-201ENST00000316788 NDUFB4O95168 129 aa16.02■□□□□ 0.16
AP3S1-201ENST00000316788 PRR20EP86478 221 aa16.02■□□□□ 0.16
AP3S1-201ENST00000316788 PRR20CP86479 221 aa16.02■□□□□ 0.16
AP3S1-201ENST00000316788 PRR20DP86480 221 aa16.02■□□□□ 0.16
AP3S1-201ENST00000316788 PRR20BP86481 221 aa16.02■□□□□ 0.16
AP3S1-201ENST00000316788 PRR20AP86496 221 aa16.02■□□□□ 0.16
AP3S1-201ENST00000316788 VHLLQ6RSH7 139 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms