RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 LINC00310P59036 64 aa14.27□□□□□ -0.13
SCAMP4-201ENST00000316097 FAM27E3Q08E93 113 aa14.27□□□□□ -0.13
SCAMP4-201ENST00000316097 TMEM183BQ1AE95 376 aa14.27□□□□□ -0.13
SCAMP4-201ENST00000316097 MRPL52Q86TS9 123 aaKnown RBP14.27□□□□□ -0.13
SCAMP4-201ENST00000316097 OR2D2Q9H210 308 aa14.27□□□□□ -0.13
SCAMP4-201ENST00000316097 KCNIP2Q9NS61 270 aa14.27□□□□□ -0.13
SCAMP4-201ENST00000316097 SPTA1P02549 2419 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 CADP27708 2225 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 OR5B21A6NL26 309 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 SERF1AO75920 110 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 THBS3P49746 956 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 YPEL3P61236 119 aaPredicted RBP14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 MRPL49Q13405 166 aaKnown RBP14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 VAMP8Q9BV40 100 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 CBY1Q9Y3M2 126 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 ZNF83P51522 516 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 EDDM3BP56851 147 aa14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 FAM53AQ6NSI3 398 aaPredicted RBP14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 KLF14Q8TD94 323 aaPredicted RBP14.26□□□□□ -0.13
SCAMP4-201ENST00000316097 IGHV1-18A0A0C4DH31 117 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 P0C879 139 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 CRISP2P16562 243 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 PAFAH1B2P68402 229 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 GFRALQ6UXV0 394 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 WDR86Q86TI4 376 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 A0A1W2PPV4 95 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 VWC2Q2TAL6 325 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 ZNF645Q8N7E2 425 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 C5orf30Q96GV9 206 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 MPC1Q9Y5U8 109 aa14.25□□□□□ -0.13
SCAMP4-201ENST00000316097 LINC00614P0C842 121 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 SELENOTP62341 195 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 ZNF90Q03938 601 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 OR5I1Q13606 314 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 Q8N7P7 452 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 OR10G8Q8NGN5 311 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 PKIBQ9C010 78 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 USF3Q68DE3 2245 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 C17orf98A8MV24 154 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 J3QT63 122 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 TMPRSS3P57727 454 aa14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 MRPS11P82912 194 aaKnown RBP14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 MRPL18Q9H0U6 180 aaKnown RBP14.24□□□□□ -0.13
SCAMP4-201ENST00000316097 SCO2A0A1W2PP80 73 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 F2Z2F3 143 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 TIMP3P35625 211 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 TFPI2P48307 235 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 DMRTA1Q5VZB9 504 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 OR5AU1Q8NGC0 362 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 CIB3Q96Q77 187 aaPredicted RBP14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 SAMD10Q9BYL1 202 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 SLC25A15Q9Y619 301 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 A0A0G2JNJ9 132 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 GRPP07492 148 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 RANP62826 216 aaKnown RBP14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 BAGE3Q86Y29 109 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 BAGE2Q86Y30 109 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 C1orf162Q8NEQ5 155 aaPredicted RBP14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 OCC1Q8TAD7 63 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 MSL2Q9HCI7 577 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 MBNL3Q9NUK0 354 aaKnown RBP14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 Q9UFV3 132 aa14.23□□□□□ -0.13
SCAMP4-201ENST00000316097 HEATR1Q9H583 2144 aaKnown RBP14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 M0R1B8 84 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 PRRG2O14669 202 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 IL6RP08887 468 aaPredicted RBP14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 RAC2P15153 192 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 CEACAM8P31997 349 aaPredicted RBP14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 H2BFWTQ7Z2G1 175 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 IGHV2OR16-5A0A0B4J2B6 119 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 SLC17A3O00476 420 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 CDIPTO14735 213 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 ARL14EPLP0DKL9 152 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 BRWD1-AS2P59051 145 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 WDR83OSQ9Y284 106 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 NBASA2RRP1 2371 aa14.22□□□□□ -0.13
SCAMP4-201ENST00000316097 PIEZO1Q92508 2521 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 CD1BP29016 333 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 CATR1Q13166 79 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 MSMPQ1L6U9 139 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 OR52L2PQ8NGH6 319 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 OBP2BQ9NPH6 170 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 C15orf62A8K5M9 175 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 CEBPDP49716 269 aaPredicted RBP14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 LINC00205P59089 165 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 HLA-DRB5Q30154 266 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 VHLLQ6RSH7 139 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 RAB1CQ92928 201 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 FAM103A1Q9BTL3 118 aaKnown RBP14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 WIPI2Q9Y4P8 454 aa14.21□□□□□ -0.13
SCAMP4-201ENST00000316097 ICE1Q9Y2F5 2266 aa14.21□□□□□ -0.14
SCAMP4-201ENST00000316097 IGLV1-44P01699 117 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 ESDP10768 282 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 COMPP49747 757 aaPredicted RBP14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 ZNF826PQ6ZT77 177 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 SCCPDHQ8NBX0 429 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 OR1L6Q8NGR2 347 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 QTRT1Q9BXR0 403 aaKnown RBP14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 RNF114Q9Y508 228 aa14.2□□□□□ -0.14
SCAMP4-201ENST00000316097 A8MXE2 369 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms