RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 LINC00311Q8N616 119 aa6.3□□□□□ -1.4
CNOT4-201ENST00000315544 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.3□□□□□ -1.4
CNOT4-201ENST00000315544 OR5AN1Q8NGI8 311 aa6.3□□□□□ -1.4
CNOT4-201ENST00000315544 FAM213BQ8TBF2 198 aa6.3□□□□□ -1.4
CNOT4-201ENST00000315544 KCNIP2Q9NS61 270 aa6.3□□□□□ -1.4
CNOT4-201ENST00000315544 ARFGEF3Q5TH69 2177 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 OOEPA6NGQ2 149 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 IFNA10P01566 189 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 PRB1P04280 392 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 VWA1Q6PCB0 445 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 OR1P1Q8NH06 330 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 RPS10P5Q9NQ39 176 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 PITPNC1Q9UKF7 332 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 RNF150Q9ULK6 438 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 DYNC2H1Q8NCM8 4307 aaKnown RBP6.29□□□□□ -1.4
CNOT4-201ENST00000315544 A0A096LNJ9 63 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 MARCH11A6NNE9 402 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 EREGO14944 169 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 TNFSF12O43508 249 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 HRASP01112 189 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 EFNB3Q15768 340 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 Q3ZCU0 254 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 LINC00322Q6ZN03 302 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-201ENST00000315544 NUP37Q8NFH4 326 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 SLC25A40Q8TBP6 338 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 TCEAL7Q9BRU2 100 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 SLC25A10Q9UBX3 287 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-201ENST00000315544 JPT1Q9UK76 154 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 UTP20O75691 2785 aaKnown RBP6.29□□□□□ -1.4
CNOT4-201ENST00000315544 C2orf70A6NJV1 201 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 DFFBO76075 338 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 GCH1P30793 250 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 ATP5G3P48201 142 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 LY6DQ14210 128 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 SPATA31B1PQ5VZV4 182 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 HCP5Q6MZN7 132 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 FAM231DQ6ZW35 169 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 CISD2Q8N5K1 135 aaKnown RBP6.29□□□□□ -1.4
CNOT4-201ENST00000315544 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.29□□□□□ -1.4
CNOT4-201ENST00000315544 PINX1Q96BK5 328 aaKnown RBP6.29□□□□□ -1.4
CNOT4-201ENST00000315544 MANBALQ9NQG1 85 aa6.29□□□□□ -1.4
CNOT4-201ENST00000315544 OR2J3O76001 311 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 METTL15P1P0C7V9 234 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 PPP1CBP62140 327 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 FAM71F2Q6NXP2 309 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 TMEM256Q8N2U0 113 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 SGMS2Q8NHU3 365 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 NINJ1Q92982 152 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 DCTN5Q9BTE1 182 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 MS4A5Q9H3V2 200 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 MYO18BQ8IUG5 2567 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 SIAH2O43255 324 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 SNRNP70P08621 437 aaKnown RBP6.28□□□□□ -1.4
CNOT4-201ENST00000315544 G6PCP35575 357 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 FXYD4P59646 89 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 OR2B8PP59922 312 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 OR2T2Q6IF00 324 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 DOLPP1Q86YN1 238 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 RPRMLQ8N4K4 120 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 THOC3Q96J01 351 aaKnown RBP6.28□□□□□ -1.4
CNOT4-201ENST00000315544 FAM210BQ96KR6 192 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 NDUFAF3Q9BU61 184 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 UNKLQ9H9P5 680 aaKnown RBP6.28□□□□□ -1.4
CNOT4-201ENST00000315544 ST8SIA5O15466 376 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 TGOLN2O43493 480 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 RAB5BP61020 215 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 BATF2Q8N1L9 274 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 S100A13Q99584 98 aa6.28□□□□□ -1.4
CNOT4-201ENST00000315544 FNDC4Q9H6D8 234 aaPredicted RBP6.28□□□□□ -1.4
CNOT4-201ENST00000315544 BORCS7-ASMTA0A0B4J1R7 106 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 OR7C1O76099 320 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 RNASE2P10153 161 aaKnown RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 FGF8P55075 233 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 KLF3P57682 345 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 FAM3BP58499 235 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 C2orf83Q53S99 150 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 SOHLH1Q5JUK2 328 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 C1orf174Q8IYL3 243 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 OR10J5Q8NHC4 309 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 CLN8Q9UBY8 286 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 KLF13Q9Y2Y9 288 aaPredicted RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 PTPRQQ9UMZ3 2332 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 C1orf196B1AJZ1 125 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 CLDN34H7C241 214 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 IFNA21P01568 189 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 IGHV3-9P01782 118 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 CRYABP02511 175 aaKnown RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 TAS2R60P59551 318 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 GAGE1Q13065 139 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 ZNF826PQ6ZT77 177 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 OCC1Q8TAD7 63 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 C8orf46Q8TAG6 207 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 TMEM147Q9BVK8 224 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 LIN7CQ9NUP9 197 aaKnown RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 TECRQ9NZ01 308 aaKnown RBP6.27□□□□□ -1.41
CNOT4-201ENST00000315544 SOX15O60248 233 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 CMTM1Q8IZ96 169 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 OR51H1Q8NH63 302 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 FXYD5Q96DB9 178 aa6.27□□□□□ -1.41
CNOT4-201ENST00000315544 GCM1Q9NP62 436 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms