RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 AARDQ4LEZ3 155 aa20.83■□□□□ 0.93
HOXB3-201ENST00000311626 ACTL10Q5JWF8 245 aa20.83■□□□□ 0.93
HOXB3-201ENST00000311626 FAM216BQ8N7L0 139 aa20.83■□□□□ 0.93
HOXB3-201ENST00000311626 TUBG2Q9NRH3 451 aa20.83■□□□□ 0.93
HOXB3-201ENST00000311626 ZNF705GA8MUZ8 300 aaPredicted RBP20.83■□□□□ 0.92
HOXB3-201ENST00000311626 PDE6DO43924 150 aa20.83■□□□□ 0.92
HOXB3-201ENST00000311626 VENTXO95231 258 aa20.83■□□□□ 0.92
HOXB3-201ENST00000311626 GZMBP10144 247 aa20.83■□□□□ 0.92
HOXB3-201ENST00000311626 KCNIP2Q9NS61 270 aa20.83■□□□□ 0.92
HOXB3-201ENST00000311626 PAX5Q02548 391 aa20.82■□□□□ 0.92
HOXB3-201ENST00000311626 C14orf144Q96I85 54 aa20.82■□□□□ 0.92
HOXB3-201ENST00000311626 FAM215AQ9Y5M1 114 aa20.82■□□□□ 0.92
HOXB3-201ENST00000311626 LHBP01229 141 aa20.82■□□□□ 0.92
HOXB3-201ENST00000311626 STAG3L2P0CL84 134 aa20.82■□□□□ 0.92
HOXB3-201ENST00000311626 STAG3L3P0CL85 134 aa20.82■□□□□ 0.92
HOXB3-201ENST00000311626 OR4S2Q8NH73 311 aa20.82■□□□□ 0.92
HOXB3-201ENST00000311626 GVINP1Q7Z2Y8 2422 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 K7EM74 188 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 CGB3P0DN86 165 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 CGB7P0DN87 165 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 IGFBP2P18065 325 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 MRPS11P82912 194 aaKnown RBP20.81■□□□□ 0.92
HOXB3-201ENST00000311626 FAM27E3Q08E93 113 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 STPG3Q8N7X2 389 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 AKAP13Q12802 2813 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 C15orf61A6NNL5 157 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 SRP14P37108 136 aaKnown RBP20.81■□□□□ 0.92
HOXB3-201ENST00000311626 CR1LQ2VPA4 569 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 LURAP1LQ8IV03 231 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 ZCCHC24Q8N2G6 241 aaKnown RBP20.81■□□□□ 0.92
HOXB3-201ENST00000311626 OCC1Q8TAD7 63 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 DMXL2Q8TDJ6 3036 aa20.81■□□□□ 0.92
HOXB3-201ENST00000311626 MBD3L4A6NDZ8 208 aaPredicted RBP20.8■□□□□ 0.92
HOXB3-201ENST00000311626 MBD3L3A6NE82 208 aaPredicted RBP20.8■□□□□ 0.92
HOXB3-201ENST00000311626 MBD3L5A6NJ08 208 aaPredicted RBP20.8■□□□□ 0.92
HOXB3-201ENST00000311626 F6UZH7 168 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 GATA2P23769 480 aaPredicted RBP20.8■□□□□ 0.92
HOXB3-201ENST00000311626 NPY1RP25929 384 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 KCNIP4Q6PIL6 250 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 OR52E5Q8NH55 327 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 SGMS2Q8NHU3 365 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 MBD3L2Q8NHZ7 208 aaPredicted RBP20.8■□□□□ 0.92
HOXB3-201ENST00000311626 NPVFQ9HCQ7 196 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 EFNB3Q15768 340 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 MLANAQ16655 118 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 SLC24A4Q8NFF2 622 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 RND1Q92730 232 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 RAB1CQ92928 201 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 GCM1Q9NP62 436 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 IDI2-AS1Q9NZ38 188 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 ATMQ13315 3056 aa20.8■□□□□ 0.92
HOXB3-201ENST00000311626 RAI1Q7Z5J4 1906 aaPredicted RBP20.8■□□□□ 0.92
HOXB3-201ENST00000311626 KBTBD11-OT1A0A1B0GTJ5 212 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 SFRP2Q96HF1 295 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 MPDU1O75352 247 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 CXorf1O96002 111 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 IGKV1-16P04430 117 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 GLRXP35754 106 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 ZADH2Q8N4Q0 377 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 OR4P4Q8NGL7 312 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 LSM4Q9Y4Z0 139 aaKnown RBP20.79■□□□□ 0.92
HOXB3-201ENST00000311626 TRAPPC1Q9Y5R8 145 aa20.79■□□□□ 0.92
HOXB3-201ENST00000311626 FAM90A9PA6NNJ1 464 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 SLC17A3O00476 420 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 CFHR2P36980 270 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 JOSD1Q15040 202 aaPredicted RBP20.78■□□□□ 0.92
HOXB3-201ENST00000311626 HLA-DRB5Q30154 266 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 ZCCHC14Q8WYQ9 949 aaKnown RBP20.78■□□□□ 0.92
HOXB3-201ENST00000311626 ADGRG4Q8IZF6 3080 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 DSCAML1Q8TD84 2053 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 GCHFRP30047 84 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 TNFAIP6P98066 277 aaPredicted RBP20.78■□□□□ 0.92
HOXB3-201ENST00000311626 LINC00469Q8N7U9 141 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 ENY2Q9NPA8 101 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 OR51B2Q9Y5P1 312 aa20.78■□□□□ 0.92
HOXB3-201ENST00000311626 SRRM4A7MD48 611 aaKnown RBP20.77■□□□□ 0.92
HOXB3-201ENST00000311626 DDTP30046 118 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 HSPE1P61604 102 aaKnown RBP20.77■□□□□ 0.92
HOXB3-201ENST00000311626 TIMM23BQ5SRD1 257 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 TEPPQ6URK8 271 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 MIR17HGQ75NE6 70 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 TMEM256Q8N2U0 113 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 CISD2Q8N5K1 135 aaKnown RBP20.77■□□□□ 0.92
HOXB3-201ENST00000311626 A0A087X0M5 115 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 A0A1B0GX30 115 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 NUPR1O60356 82 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 IGHV1-46P01743 117 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 PKIAP61925 76 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 LRFN3Q9BTN0 628 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 PCNX1Q96RV3 2341 aa20.77■□□□□ 0.92
HOXB3-201ENST00000311626 TRGV10A0A0A0MS01 117 aa20.76■□□□□ 0.91
HOXB3-201ENST00000311626 MDFIC2A0A1B0GVS7 189 aa20.76■□□□□ 0.91
HOXB3-201ENST00000311626 TMPRSS2O15393 492 aa20.76■□□□□ 0.91
HOXB3-201ENST00000311626 TMPRSS3P57727 454 aa20.76■□□□□ 0.91
HOXB3-201ENST00000311626 FAM216AQ8WUB2 273 aa20.76■□□□□ 0.91
HOXB3-201ENST00000311626 GAFA1Q96PS6 74 aa20.76■□□□□ 0.91
HOXB3-201ENST00000311626 RNF7Q9UBF6 113 aa20.76■□□□□ 0.91
HOXB3-201ENST00000311626 GATCO43716 136 aaKnown RBP20.76■□□□□ 0.91
HOXB3-201ENST00000311626 RPL15P61313 204 aaKnown RBP20.76■□□□□ 0.91
HOXB3-201ENST00000311626 RPL31P62899 125 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms