RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 ZNF735P0CB33 412 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 APELAP0DMC3 54 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 RPA2P15927 270 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 FAUP35544 74 aaKnown RBP13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 PIGPP57054 158 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 AP3S2P59780 193 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 PYDC2Q56P42 97 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 SPANXN2Q5MJ10 180 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 C10orf55Q5SWW7 151 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 THOC7Q6I9Y2 204 aaKnown RBP13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 REC114Q7Z4M0 266 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 TTC9CQ8N5M4 171 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 OR4C16Q8NGL9 310 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 FYTTD1Q96QD9 318 aaKnown RBP13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 TSC22D3Q99576 134 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 COPZ2Q9P299 210 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 C14orf166Q9Y224 244 aaKnown RBP13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
NDUFA3-201ENST00000303553 FAM223BA6NKX1 122 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 NPIPB5A8MRT5 1133 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 LINC01619G3V211 115 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 B3GALNT1O75752 331 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 SNAPC5O75971 98 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 ATG12O94817 140 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 KRASP01116 189 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 FAM223AQ8IWN6 122 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 SRSF8Q9BRL6 282 aaKnown RBP13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 THAP7Q9BT49 309 aaPredicted RBP13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 ZMAT5Q9UDW3 170 aaKnown RBP13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 SCP2D1Q9UJQ7 156 aa13.11□□□□□ -0.31
NDUFA3-201ENST00000303553 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 H0Y980 276 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 IGHV3-11P01762 117 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 HSPB1P04792 205 aaKnown RBP13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 CTSDP07339 412 aaPredicted RBP13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 IL6RP08887 468 aaPredicted RBP13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 ZNF585BQ52M93 769 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 FAM209BQ5JX69 171 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 FAAP20Q6NZ36 180 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 HSD17B13Q7Z5P4 300 aaPredicted RBP13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 CCDC190Q86UF4 302 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 Q8N402 240 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 OR13C8Q8NGS7 320 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 MARCH1Q8TCQ1 289 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 DEDD2Q8WXF8 326 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 SCGB3A2Q96PL1 93 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 SLC2A8Q9NY64 477 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 FKBP11Q9NYL4 201 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 V9GYH0 126 aa13.1□□□□□ -0.31
NDUFA3-201ENST00000303553 PI3P19957 117 aa13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 G6PCP35575 357 aa13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 ETV6P41212 452 aa13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 OR2B8PP59922 312 aa13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 TOMM5Q8N4H5 51 aa13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 NECAP1Q8NC96 275 aa13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 QTRT1Q9BXR0 403 aaKnown RBP13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 RANGRFQ9HD47 186 aaPredicted RBP13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 MCUBQ9NWR8 336 aa13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 PRNDQ9UKY0 176 aa13.09□□□□□ -0.31
NDUFA3-201ENST00000303553 C3orf85A0A1B0GTC6 90 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 HMX3A6NHT5 357 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 CYB5BO43169 146 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 HIST1H1BP16401 226 aaKnown RBP13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 ZP3P21754 424 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 PSMB6P28072 239 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 RHOGP84095 191 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 C9orf66Q5T8R8 295 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 FOXB2Q5VYV0 432 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 H2BFWTQ7Z2G1 175 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 OR51S1Q8NGJ8 323 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 ALX4Q9H161 411 aaPredicted RBP13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 CMYA5Q8N3K9 4069 aa13.08□□□□□ -0.32
NDUFA3-201ENST00000303553 IGHV4OR15-8A0A075B7B6 117 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 A0A087WW49 117 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 TRBV9A0A0B4J1U6 114 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 CRYGCP07315 174 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 DEFA4P12838 97 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 ATP5G2Q06055 141 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 OR1L8Q8NGR8 309 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 OR5B3Q8NH48 314 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 NOTCH3Q9UM47 2321 aa13.07□□□□□ -0.32
NDUFA3-201ENST00000303553 TRAV3A0A0B4J244 114 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 TEX13DA0A0J9YY54 714 aaPredicted RBP13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 SEC14L6B5MCN3 397 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 E7EUB6 86 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 OVOL1O14753 267 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 WIPF1O43516 503 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 TRAPPC2P0DI81 140 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 TRAPPC2BP0DI82 140 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 CTRB1P17538 263 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 INSL3P51460 131 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 AKR1C2P52895 323 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 ZNF79Q15937 498 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 TRIM16LQ309B1 348 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 CTRB2Q6GPI1 263 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 ZNF343Q6P1L6 599 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 OR6Q1Q8NGQ2 317 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 OR4A16Q8NH70 328 aa13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 LSM10Q969L4 123 aaKnown RBP13.06□□□□□ -0.32
NDUFA3-201ENST00000303553 TRIM63Q969Q1 353 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms