RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 TMEM250H0YL14 139 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 CDK2AP1O14519 115 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 ATXN7O15265 892 aaPredicted RBP13.75□□□□□ -0.21
BRD3-201ENST00000303407 CEACAM1P13688 526 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 ATP5IP56385 69 aaPredicted RBP13.75□□□□□ -0.21
BRD3-201ENST00000303407 CENPWQ5EE01 88 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 IGKV1-12A0A0C4DH73 117 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 IGKV1D-12P01611 117 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 CD99P14209 185 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 ZNF385CQ66K41 422 aaPredicted RBP13.75□□□□□ -0.21
BRD3-201ENST00000303407 OSR1Q8TAX0 266 aaPredicted RBP13.75□□□□□ -0.21
BRD3-201ENST00000303407 IFI27L2Q9H2X8 130 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 PNRC2Q9NPJ4 139 aaKnown RBP13.75□□□□□ -0.21
BRD3-201ENST00000303407 LDLRAD4O15165 306 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 IFITM10A6NMD0 228 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 RNF224P0DH78 156 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 WDR82Q6UXN9 313 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 ZNF738Q8NE65 137 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 NPIPB11E5RHQ5 1161 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 CD59P13987 128 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 RPL13AP40429 203 aaKnown RBP13.75□□□□□ -0.21
BRD3-201ENST00000303407 Q0VFX4 171 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 OR10J6PQ8NGY7 276 aa13.75□□□□□ -0.21
BRD3-201ENST00000303407 PF4V1P10720 104 aa13.74□□□□□ -0.21
BRD3-201ENST00000303407 ZNF324BQ6AW86 544 aaPredicted RBP13.74□□□□□ -0.21
BRD3-201ENST00000303407 DYNLRB2Q8TF09 96 aa13.74□□□□□ -0.21
BRD3-201ENST00000303407 MRPL20Q9BYC9 149 aaKnown RBP13.74□□□□□ -0.21
BRD3-201ENST00000303407 GPR61Q9BZJ8 451 aa13.74□□□□□ -0.21
BRD3-201ENST00000303407 IGKV1-27A0A075B6S5 117 aa13.74□□□□□ -0.21
BRD3-201ENST00000303407 VENTXO95231 258 aa13.74□□□□□ -0.21
BRD3-201ENST00000303407 SPATA45Q537H7 98 aa13.74□□□□□ -0.21
BRD3-201ENST00000303407 CDC42EP3Q9UKI2 254 aa13.74□□□□□ -0.21
BRD3-201ENST00000303407 PTPRDP23468 1912 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 IGKV3D-15A0A087WSY6 115 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 RPL7P18124 248 aaKnown RBP13.73□□□□□ -0.21
BRD3-201ENST00000303407 HERVK_113P61574 105 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 SPTBP11277 2137 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 RAMP3O60896 148 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 CGAP01215 116 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 SRIP30626 198 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 TCTAP57738 103 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 GATAD1Q8WUU5 269 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 RELBQ01201 579 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 WFDC1Q9HC57 220 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 IGHV1-18A0A0C4DH31 117 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 FOXG1P55316 489 aaPredicted RBP13.73□□□□□ -0.21
BRD3-201ENST00000303407 ZNF841Q6ZN19 808 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 WFIKKN1Q96NZ8 548 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 ZMAT5Q9UDW3 170 aaKnown RBP13.73□□□□□ -0.21
BRD3-201ENST00000303407 SAA2-SAA4A0A096LPE2 208 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 GRIFINA4D1Z8 144 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 SAA2P0DJI9 122 aaPredicted RBP13.73□□□□□ -0.21
BRD3-201ENST00000303407 ZCCHC14Q8WYQ9 949 aaKnown RBP13.73□□□□□ -0.21
BRD3-201ENST00000303407 ZFP30Q9Y2G7 519 aa13.73□□□□□ -0.21
BRD3-201ENST00000303407 TFPI2P48307 235 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 SRSF12Q8WXF0 261 aaKnown RBP13.72□□□□□ -0.21
BRD3-201ENST00000303407 SCN8AQ9UQD0 1980 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 SCO2A0A1W2PP80 73 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 COX6B1P14854 86 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 ATP5G2Q06055 141 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 FHL1Q13642 323 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 OR4D5Q8NGN0 318 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 ARID1AO14497 2285 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 C5orf63A6NC05 138 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 KIAA1644Q3SXP7 199 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 LBHQ53QV2 105 aaPredicted RBP13.72□□□□□ -0.21
BRD3-201ENST00000303407 DNM1P46Q6ZS02 220 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 LINC00312Q9Y6C7 94 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 TRBV9A0A0B4J1U6 114 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 ATP5G3P48201 142 aa13.72□□□□□ -0.21
BRD3-201ENST00000303407 SSBP3Q9BWW4 388 aaPredicted RBP13.72□□□□□ -0.21
BRD3-201ENST00000303407 MEF2CQ06413 473 aaPredicted RBP13.71□□□□□ -0.21
BRD3-201ENST00000303407 SCGB1D4Q6XE38 83 aa13.71□□□□□ -0.21
BRD3-201ENST00000303407 GTF3AQ92664 365 aaKnown RBP13.71□□□□□ -0.21
BRD3-201ENST00000303407 A0A1W2PS18 150 aa13.71□□□□□ -0.21
BRD3-201ENST00000303407 ZNF25P17030 456 aaPredicted RBP13.71□□□□□ -0.21
BRD3-201ENST00000303407 CKS2P33552 79 aa13.71□□□□□ -0.21
BRD3-201ENST00000303407 GOLT1AQ6ZVE7 132 aa13.71□□□□□ -0.21
BRD3-201ENST00000303407 SEMA5BQ9P283 1151 aa13.71□□□□□ -0.21
BRD3-201ENST00000303407 C17orf100A8MU93 164 aa13.71□□□□□ -0.21
BRD3-201ENST00000303407 LY6EQ16553 131 aa13.71□□□□□ -0.21
BRD3-201ENST00000303407 ELOVL1Q9BW60 279 aa13.71□□□□□ -0.21
BRD3-201ENST00000303407 OR4C46A6NHA9 309 aa13.71□□□□□ -0.22
BRD3-201ENST00000303407 IL4P05112 153 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 TM4SF20Q53R12 229 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 RTN4RL2Q86UN3 420 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 FBXL15Q9H469 300 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 IGHV3OR16-10A0A075B7F0 116 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 LOC105371267A0A1B0GV96 52 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 YPEL1O60688 119 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 FAM166AQ6J272 317 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 YPEL2Q96QA6 119 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 SLC25A33Q9BSK2 321 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 FGF16O43320 207 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 MAS1LP35410 378 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 ICAM4Q14773 271 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 MORN2Q502X0 79 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 DGAT2L7PQ6IED9 249 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 RNF144BQ7Z419 303 aa13.7□□□□□ -0.22
BRD3-201ENST00000303407 NEU1Q99519 415 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms