RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 NHLRC2Q8NBF2 726 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 OR13D1Q8NGV5 346 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 NPCDR1Q9BY65 106 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 PARD6GQ9BYG4 376 aaPredicted RBP12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 ACTR3CQ9C0K3 210 aaPredicted RBP12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 A0A087WWC5 75 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 SAA2-SAA4A0A096LPE2 208 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 BTBD17A6NE02 478 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 SEC14L6B5MCN3 397 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 SAA2P0DJI9 122 aaPredicted RBP12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 DUTP33316 252 aaKnown RBP12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 MEF2BQ02080 365 aaPredicted RBP12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 DIAPH2-AS1Q14236 149 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 FAM90A2PQ658T7 463 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 KIR3DL3Q8N743 410 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 LSM10Q969L4 123 aaKnown RBP12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 PARLQ9H300 379 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 MS4A5Q9H3V2 200 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 PLSCR4Q9NRQ2 329 aa12.89□□□□□ -0.35
CHAF1A-201ENST00000301280 A0A1B0GWJ7 208 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 IGHG3P01860 377 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 COX7A1P24310 79 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 TCL1AP56279 114 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 LGALS4P56470 323 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 RAB4BP61018 213 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 BSPH1Q075Z2 132 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 EIF4EBP1Q13541 118 aaPredicted RBP12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 ZNF506Q5JVG8 444 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 TRAV1-1A0A0B4J248 108 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 MGST3O14880 152 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 CD24P25063 80 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 RPL31P62899 125 aaKnown RBP12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 P2RY6Q15077 328 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 CT45A1Q5HYN5 189 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 OR4P4Q8NGL7 312 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 CT45A3Q8NHU0 189 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 SERTAD4Q9NUC0 356 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 RNF7Q9UBF6 113 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 A0A1B0GUS0 222 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 GZMHP20718 246 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 DEFA6Q01524 100 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 TMEM241Q24JQ0 296 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 FAM78BQ5VT40 261 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 STUMQ69YW2 141 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 OR10X1Q8NGY0 326 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 VAX2Q9UIW0 290 aa12.88□□□□□ -0.35
CHAF1A-201ENST00000301280 TNFSF4P23510 183 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 C1orf185Q5T7R7 199 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 ZNF66Q6ZN08 573 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 RBMXL3Q8N7X1 1067 aaKnown RBP12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 OR6C3Q9NZP0 311 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 PTPN13Q12923 2485 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 PPP1R2P9O14990 202 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 ARL14EPLP0DKL9 152 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 CD40P25942 277 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 SAP30LQ9HAJ7 183 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 TCF19Q9Y242 345 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 CLDN34H7C241 214 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 IGHV1-46P01743 117 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 HCP5Q6MZN7 132 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 Q8TCH9 128 aa12.87□□□□□ -0.35
CHAF1A-201ENST00000301280 FOXH1O75593 365 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 CD33P20138 364 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 PIP4P1Q86T03 277 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 SLC35D1Q9NTN3 355 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 FUT9Q9Y231 359 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 C1QTNF9P0C862 333 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 AGMATQ9BSE5 352 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 SCNM1Q9BWG6 230 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 TIMM8BQ9Y5J9 83 aaPredicted RBP12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 S4R3C0 116 aa12.86□□□□□ -0.35
CHAF1A-201ENST00000301280 SRRM5B3KS81 715 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 P0C879 139 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 MGST1P10620 155 aaKnown RBP12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 GALR1P47211 349 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 CD81P60033 236 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 PAX5Q02548 391 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 PMS2P11Q13670 270 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 LYPD2Q6UXB3 125 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 SLC35E3Q7Z769 313 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 PXMP4Q9Y6I8 212 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 ZNF320A2RRD8 509 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 IGFBP2P18065 325 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 MRGPRGQ86SM5 289 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 CA5BP1Q8WTZ4 195 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 HSPB7Q9UBY9 170 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 C16orf97H3BN30 126 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 SLC17A3O00476 420 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 CA2P00918 260 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 OR4A47Q6IF82 309 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 TMEM108Q6UXF1 575 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 HIST1H2BLQ99880 126 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 PLEKHA3Q9HB20 300 aa12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 SEPSECSQ9HD40 501 aaKnown RBP12.85□□□□□ -0.35
CHAF1A-201ENST00000301280 C15orf62A8K5M9 175 aa12.84□□□□□ -0.35
CHAF1A-201ENST00000301280 J3QR06 171 aa12.84□□□□□ -0.35
CHAF1A-201ENST00000301280 PRR27Q6MZM9 219 aa12.84□□□□□ -0.35
CHAF1A-201ENST00000301280 TCF23Q7RTU1 214 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms