RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 R3HDM4Q96D70 268 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 RNF126Q9BV68 326 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 MRPL20Q9BYC9 149 aaKnown RBP16.78■□□□□ 0.28
SMCO4-201ENST00000298966 PLSCR3Q9NRY6 295 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 MBD2Q9UBB5 411 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 WASHC3Q9Y3C0 194 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 BOLA1Q9Y3E2 137 aa16.78■□□□□ 0.28
SMCO4-201ENST00000298966 A0A1W2PRD5 423 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 A0A1W2PRF3 423 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 A0A1W2PRM7 423 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 MARCH11A6NNE9 402 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 H0YJW9 148 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 L7N2F9 121 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 ARPC5O15511 151 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 CXCL2P19875 107 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 LGALS4P56470 323 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 ZNF345Q14585 488 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 OR2B11Q5JQS5 317 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 TPTE2P1Q5T6R2 138 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 H2BFWTQ7Z2G1 175 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 KLHDC1Q8N7A1 406 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 OR4C13Q8NGP0 309 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 GON7Q9BXV9 100 aa16.77■□□□□ 0.28
SMCO4-201ENST00000298966 H0YIZ8 118 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 ST8SIA3O43173 380 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 OR2F2O95006 317 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 IGKV1-5P01602 117 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 P0C879 139 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 NKX2-1P43699 371 aaPredicted RBP16.76■□□□□ 0.27
SMCO4-201ENST00000298966 OR2F1Q13607 317 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 TMEM177Q53S58 311 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 OR2T6Q8NHC8 308 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 GPR146Q96CH1 333 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 RNF5Q99942 180 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 MFFQ9GZY8 342 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 SLA2Q9H6Q3 261 aa16.76■□□□□ 0.27
SMCO4-201ENST00000298966 A0A0D9SG52 128 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 PITX3O75364 302 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 DEDDO75618 318 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 LY86O95711 162 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 CRYZL1O95825 349 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 KRASP01116 189 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 MBPP02686 304 aaPredicted RBP16.75■□□□□ 0.27
SMCO4-201ENST00000298966 S100A10P60903 97 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 ACOT7LQ6ZUV0 252 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 DMBX1Q8NFW5 382 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 OR1S1Q8NH92 325 aa16.75■□□□□ 0.27
SMCO4-201ENST00000298966 FLYWCH2Q96CP2 140 aaKnown RBP16.75■□□□□ 0.27
SMCO4-201ENST00000298966 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.75■□□□□ 0.27
SMCO4-201ENST00000298966 IGHV1-3A0A0C4DH29 117 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 A0A0G2JRQ6 117 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 H7C2Y5 167 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 K7EPK0 472 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 PVALBP20472 110 aaPredicted RBP16.74■□□□□ 0.27
SMCO4-201ENST00000298966 SAA4P35542 130 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 LGALS7P47929 136 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 PRB3Q04118 309 aaPredicted RBP16.74■□□□□ 0.27
SMCO4-201ENST00000298966 NSUN5P1Q3KNT7 163 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 KCNRGQ8N5I3 272 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 FAM71E2Q8N5Q1 922 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 VSTM2AQ8TAG5 236 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 DCUN1D4Q92564 292 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 MALSU1Q96EH3 234 aa16.74■□□□□ 0.27
SMCO4-201ENST00000298966 COL7A1Q02388 2944 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 RNF222A6NCQ9 220 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 H3BUX3 64 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 FGF2P09038 288 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 CD1BP29016 333 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 S100A11P31949 105 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 G6PCP35575 357 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 NUP62P37198 522 aaPredicted RBP16.73■□□□□ 0.27
SMCO4-201ENST00000298966 IFITM2Q01629 132 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 ID3Q02535 119 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 KLRD1Q13241 179 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 HABP2Q14520 560 aaPredicted RBP16.73■□□□□ 0.27
SMCO4-201ENST00000298966 TMUB2Q71RG4 321 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 FOXRED2Q8IWF2 684 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 INO80EQ8NBZ0 244 aaPredicted RBP16.73■□□□□ 0.27
SMCO4-201ENST00000298966 OR5AC2Q9NZP5 309 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 CACNG5Q9UF02 275 aa16.73■□□□□ 0.27
SMCO4-201ENST00000298966 E5RGE8 158 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 RGS13O14921 159 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 SHOXO15266 292 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 MED6O75586 246 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 SCGB1D2O95969 90 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 LINC00205P59089 165 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 OPCMLQ14982 345 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 AARDQ4LEZ3 155 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 OR4A5Q8NH83 315 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 RHOVQ96L33 236 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 AQP10Q96PS8 301 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 BET1LQ9NYM9 111 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 NSG2Q9Y328 171 aa16.72■□□□□ 0.27
SMCO4-201ENST00000298966 LSM5Q9Y4Y9 91 aaKnown RBP16.72■□□□□ 0.27
SMCO4-201ENST00000298966 A0A1W2PPI3 338 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 WRBO00258 174 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 REG1BP48304 166 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 DLX1P56177 255 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 LY6EQ16553 131 aa16.71■□□□□ 0.27
SMCO4-201ENST00000298966 MOB3BQ86TA1 216 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms