RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 KCNAB3O43448 404 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 BCL2L11O43521 198 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 TSC22D2O75157 780 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 KRASP01116 189 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 CD1BP29016 333 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 P2RY1P47900 373 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 AP2S1P53680 142 aaPredicted RBP12.29□□□□□ -0.44
NCK1-201ENST00000288986 HABP2Q14520 560 aaPredicted RBP12.29□□□□□ -0.44
NCK1-201ENST00000288986 AARDQ4LEZ3 155 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 OR4S2Q8NH73 311 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 R3HDM4Q96D70 268 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
NCK1-201ENST00000288986 NABP2Q9BQ15 211 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 FAM90A26D6RGX4 464 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 TMEM11P17152 192 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 POLR2GP62487 172 aaKnown RBP eCLIP12.29□□□□□ -0.44
NCK1-201ENST00000288986 POU2AF1Q16633 256 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 ZNF767PQ75MW2 155 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 OR5AN1Q8NGI8 311 aa12.29□□□□□ -0.44
NCK1-201ENST00000288986 TAF15Q92804 592 aaKnown RBP eCLIP12.29□□□□□ -0.44
NCK1-201ENST00000288986 TAGLNQ01995 201 aaKnown RBP12.28□□□□□ -0.44
NCK1-201ENST00000288986 KRTAP24-1Q3LI83 254 aa12.28□□□□□ -0.44
NCK1-201ENST00000288986 FBLN7Q53RD9 439 aa12.28□□□□□ -0.44
NCK1-201ENST00000288986 DHRS7BQ6IAN0 325 aaPredicted RBP12.28□□□□□ -0.44
NCK1-201ENST00000288986 SLC51BQ86UW2 128 aa12.28□□□□□ -0.44
NCK1-201ENST00000288986 OR2T10Q8NGZ9 312 aa12.28□□□□□ -0.44
NCK1-201ENST00000288986 H7C2Y5 167 aa12.27□□□□□ -0.44
NCK1-201ENST00000288986 CHST1O43916 411 aa12.27□□□□□ -0.44
NCK1-201ENST00000288986 CFDP00746 253 aaPredicted RBP12.27□□□□□ -0.44
NCK1-201ENST00000288986 NQO2P16083 231 aa12.27□□□□□ -0.44
NCK1-201ENST00000288986 RPL12P30050 165 aaKnown RBP12.27□□□□□ -0.44
NCK1-201ENST00000288986 NUP62P37198 522 aaPredicted RBP12.27□□□□□ -0.44
NCK1-201ENST00000288986 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.27□□□□□ -0.44
NCK1-201ENST00000288986 ZNF680Q8NEM1 530 aa12.27□□□□□ -0.44
NCK1-201ENST00000288986 TMEM158Q8WZ71 300 aa12.27□□□□□ -0.44
NCK1-201ENST00000288986 EAF1Q96JC9 268 aaPredicted RBP12.27□□□□□ -0.44
NCK1-201ENST00000288986 SLC25A33Q9BSK2 321 aa12.27□□□□□ -0.44
NCK1-201ENST00000288986 PAIP2BQ9ULR5 123 aaKnown RBP12.27□□□□□ -0.44
NCK1-201ENST00000288986 KANTRA0A1W2PQU2 76 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 H0YJW9 148 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 TMEM50AO95807 157 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 MOSP00540 346 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 MC5RP33032 325 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 PAX9P55771 341 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 H2BFWTQ7Z2G1 175 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 OR8H1Q8NGG4 311 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 RBM14Q96PK6 669 aaKnown RBP12.27□□□□□ -0.45
NCK1-201ENST00000288986 ARPC5LQ9BPX5 153 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 CYTL1Q9NRR1 136 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.27□□□□□ -0.45
NCK1-201ENST00000288986 HSPB7Q9UBY9 170 aa12.27□□□□□ -0.45
NCK1-201ENST00000288986 NCBP2LA6PVI3 153 aaKnown RBP12.26□□□□□ -0.45
NCK1-201ENST00000288986 CRYZL1O95825 349 aa12.26□□□□□ -0.45
NCK1-201ENST00000288986 IL6RP08887 468 aaPredicted RBP12.26□□□□□ -0.45
NCK1-201ENST00000288986 RRASP10301 218 aa12.26□□□□□ -0.45
NCK1-201ENST00000288986 PVALBP20472 110 aaPredicted RBP12.26□□□□□ -0.45
NCK1-201ENST00000288986 RPL15P61313 204 aaKnown RBP12.26□□□□□ -0.45
NCK1-201ENST00000288986 EBI3Q14213 229 aa12.26□□□□□ -0.45
NCK1-201ENST00000288986 RAB40CQ96S21 281 aa12.26□□□□□ -0.45
NCK1-201ENST00000288986 MAGT1Q9H0U3 335 aa12.26□□□□□ -0.45
NCK1-201ENST00000288986 SLC35D1Q9NTN3 355 aa12.26□□□□□ -0.45
NCK1-201ENST00000288986 LYRM2Q9NU23 88 aaPredicted RBP12.26□□□□□ -0.45
NCK1-201ENST00000288986 SYNGR2O43760 224 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 SSSCA1O60232 199 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 OR9G9P0C7N8 305 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 EXOSC2Q13868 293 aaKnown RBP12.25□□□□□ -0.45
NCK1-201ENST00000288986 RTL8BQ17RB0 113 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 OR2C3Q8N628 320 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 C1RLQ9NZP8 487 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 APOA2P02652 100 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 TNFRSF9Q07011 255 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 C16orf82Q7Z2V1 217 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 C19orf24Q9BVV8 132 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 NPFFR1Q9GZQ6 430 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 WASHC3Q9Y3C0 194 aa12.25□□□□□ -0.45
NCK1-201ENST00000288986 TAAR5O14804 337 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 HRASP01112 189 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 IFNA7P01567 189 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 IGKV1-16P04430 117 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 TAS2R30P59541 319 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 ERVK-16P61578 105 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 RELBQ01201 579 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 PDLIM3Q53GG5 364 aaPredicted RBP12.24□□□□□ -0.45
NCK1-201ENST00000288986 TMEM177Q53S58 311 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 PDPNQ86YL7 162 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 OSR1Q8TAX0 266 aaPredicted RBP12.24□□□□□ -0.45
NCK1-201ENST00000288986 RITA1Q96K30 269 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 RHOVQ96L33 236 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 WSB1Q9Y6I7 421 aa12.24□□□□□ -0.45
NCK1-201ENST00000288986 COL6A5A8TX70 2615 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 WRBO00258 174 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 NXPH3O95157 252 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 F2RL1P55085 397 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 BLCAPP62952 87 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 TMEM252Q8N6L7 170 aa12.23□□□□□ -0.45
NCK1-201ENST00000288986 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms