RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 CYP2G1PQ6ZSU1 146 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 OR1P1Q8NH06 330 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 NPVFQ9HCQ7 196 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 BOD1L1Q8NFC6 3051 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 CBLN1P23435 193 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 CHRNB4P30926 498 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 MISP3Q96FF7 219 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
SMAD6-201ENST00000288840 A0A1B0GUS0 222 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 CA2P00918 260 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 IGFBP2P18065 325 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 GNG4P50150 75 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 ERHP84090 104 aaKnown RBP13.22□□□□□ -0.29
SMAD6-201ENST00000288840 ACSF3Q4G176 576 aaPredicted RBP13.22□□□□□ -0.29
SMAD6-201ENST00000288840 ODF3L1Q8IXM7 274 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 NCKAP5O14513 1909 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 ELOA3CA0A087WX78 387 aaPredicted RBP13.22□□□□□ -0.29
SMAD6-201ENST00000288840 CRYBB3P26998 211 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 MORN2Q502X0 79 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 CGAP01215 116 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 DUTP33316 252 aaKnown RBP13.22□□□□□ -0.29
SMAD6-201ENST00000288840 SPATA31B1PQ5VZV4 182 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 GFRALQ6UXV0 394 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 MOB3BQ86TA1 216 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 DOLPP1Q86YN1 238 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 MBD3L1Q8WWY6 194 aa13.22□□□□□ -0.29
SMAD6-201ENST00000288840 A0A087WWC5 75 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 SS18L1O75177 396 aaPredicted RBP13.21□□□□□ -0.29
SMAD6-201ENST00000288840 WT1P19544 449 aaPredicted RBP13.21□□□□□ -0.29
SMAD6-201ENST00000288840 COX7A1P24310 79 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 MLANAQ16655 118 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 HCP5Q6MZN7 132 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 TMEM14EPQ6UXP3 125 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 CEACAM1P13688 526 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 CAMPP49913 170 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 KRTAP27-1Q3LI81 207 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 C1QL4Q86Z23 238 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 STPG3Q8N7X2 389 aa13.21□□□□□ -0.29
SMAD6-201ENST00000288840 SNURFLB1AK76 121 aa13.21□□□□□ -0.3
SMAD6-201ENST00000288840 TGOLN2O43493 480 aa13.21□□□□□ -0.3
SMAD6-201ENST00000288840 COX7A2P2O60397 106 aa13.21□□□□□ -0.3
SMAD6-201ENST00000288840 CCL3L1P16619 93 aa13.21□□□□□ -0.3
SMAD6-201ENST00000288840 RAB7AP51149 207 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 CNN1P51911 297 aaKnown RBP13.2□□□□□ -0.3
SMAD6-201ENST00000288840 SAP30LQ9HAJ7 183 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 KCNIP2Q9NS61 270 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 UBE2L3P68036 154 aaKnown RBP13.2□□□□□ -0.3
SMAD6-201ENST00000288840 SPRNQ5BIV9 151 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 OR8I2Q8N0Y5 310 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 HIST3H2BBQ8N257 126 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 WDR31Q8NA23 367 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 ANAPC16Q96DE5 110 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 BTF3L4Q96K17 158 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 EGLN1Q9GZT9 426 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 MBNL3Q9NUK0 354 aaKnown RBP13.2□□□□□ -0.3
SMAD6-201ENST00000288840 TRGV8A0A0C4DH27 118 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 ZNF891A8MT65 544 aaPredicted RBP13.2□□□□□ -0.3
SMAD6-201ENST00000288840 CXorf1O96002 111 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 COL8A2P25067 703 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 ASPHD1Q5U4P2 390 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 OR4A47Q6IF82 309 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 PQLC2Q6ZP29 291 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 GCSAMQ8N6F7 178 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 SCRT1Q9BWW7 348 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 CLCF1Q9UBD9 225 aa13.2□□□□□ -0.3
SMAD6-201ENST00000288840 HELTA6NFD8 242 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 TDGF1P13385 188 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 CRISP2P16562 243 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 CD82P27701 267 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 SRSF7Q16629 238 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMAD6-201ENST00000288840 Q5PR19 223 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 TMEM108Q6UXF1 575 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 HIST1H2BLQ99880 126 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 SRD5A3Q9H8P0 318 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 PAM16Q9Y3D7 125 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 NOTCH3Q9UM47 2321 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 IGKV1D-17A0A075B6S4 117 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 TRAV34A0A0B4J273 112 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 hADV38S2A0JD32 116 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 AHRRA9YTQ3 701 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 PDE6DO43924 150 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 IGHV2-5P01817 119 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
SMAD6-201ENST00000288840 HES1Q14469 280 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 TRAT1Q6PIZ9 186 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 Q8NFD4 153 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 TMEM250H0YL14 139 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 MKRN2OSH3BPM6 223 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 CNIH1O95406 144 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 IL6RP08887 468 aaPredicted RBP13.19□□□□□ -0.3
SMAD6-201ENST00000288840 STARD4Q96DR4 205 aa13.19□□□□□ -0.3
SMAD6-201ENST00000288840 SSBP3Q9BWW4 388 aaPredicted RBP13.19□□□□□ -0.3
SMAD6-201ENST00000288840 SEPSECSQ9HD40 501 aaKnown RBP13.19□□□□□ -0.3
SMAD6-201ENST00000288840 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 ERVK11-1P61568 191 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 HSPE1P61604 102 aaKnown RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 KDF1Q8NAX2 398 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 OR10W1Q8NGF6 305 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 C22orf15Q8WYQ4 148 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms