RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 VSIG4Q9Y279 399 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 SORL1Q92673 2214 aa7.06□□□□□ -1.28
HMGN1-201ENST00000288344 ANKRD20A5PA0PJZ0 165 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 DPPA5A6NC42 116 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 UPK2O00526 184 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 S1PR2O95136 353 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 MYOD1P15172 320 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 MAS1LP35410 378 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 OR2B8PP59922 312 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 ECSCRQ19T08 205 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 STEAP1BQ6NZ63 245 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 TMEM17Q86X19 198 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 C1QL4Q86Z23 238 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 MMD2Q8IY49 270 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 POC5Q8NA72 575 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 OR5T1Q8NG75 326 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 OR13C8Q8NGS7 320 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 OR4A5Q8NH83 315 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 MCFD2Q8NI22 146 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 CD300LFQ8TDQ1 290 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 TCTEX1D2Q8WW35 142 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 TRIM63Q969Q1 353 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 MISP3Q96FF7 219 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 SDHCQ99643 169 aaPredicted RBP7.05□□□□□ -1.28
HMGN1-201ENST00000288344 RTBDNQ9BSG5 229 aaPredicted RBP7.05□□□□□ -1.28
HMGN1-201ENST00000288344 ALX4Q9H161 411 aaPredicted RBP7.05□□□□□ -1.28
HMGN1-201ENST00000288344 SLA2Q9H6Q3 261 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 SLC2A9Q9NRM0 540 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 SLC2A8Q9NY64 477 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 RSL24D1Q9UHA3 163 aaKnown RBP7.05□□□□□ -1.28
HMGN1-201ENST00000288344 GPR132Q9UNW8 380 aa7.05□□□□□ -1.28
HMGN1-201ENST00000288344 DBX1A6NMT0 343 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 ZNF561-AS1K7EIQ3 104 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 MPPED1O15442 326 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 RGS5O15539 181 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 HRASP01112 189 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 RLN1P04808 185 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 OR9G9P0C7N8 305 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 PF4V1P10720 104 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 NQO2P16083 231 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 CTRB1P17538 263 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 TAS2R19P59542 299 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 HERV-K104P61576 105 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 KIR3DS1Q14943 382 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 PLGLAQ15195 96 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 CTRB2Q6GPI1 263 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 LPCAT3Q6P1A2 487 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 ZNF343Q6P1L6 599 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 IL34Q6ZMJ4 242 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 OR11H1Q8NG94 326 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 OR1N2Q8NGR9 330 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 OR51H1Q8NH63 302 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 GRPEL2Q8TAA5 225 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 VSTM2AQ8TAG5 236 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 BORCS5Q969J3 196 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 SEC22AQ96IW7 307 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 COMMD9Q9P000 198 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 X6R8D5 127 aa7.04□□□□□ -1.28
HMGN1-201ENST00000288344 TEX50A0A1B0GTY4 177 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 IGLC7A0M8Q6 106 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 FABP12A6NFH5 140 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 HMX3A6NHT5 357 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 NPIPB5A8MRT5 1133 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 CNIH1O95406 144 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 DUS4LO95620 317 aaKnown RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 RAB3DO95716 219 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 LGALS1P09382 135 aaKnown RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 HLA-GP17693 338 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 LPAR6P43657 344 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 TSPAN5P62079 268 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 RPL8P62917 257 aaKnown RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 CATR1Q13166 79 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 KLF9Q13886 244 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 TNXAQ16473 311 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 PHLDA2Q53GA4 152 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 PDLIM3Q53GG5 364 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 RNASE12Q5GAN4 147 aaKnown RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 RNASE10Q5GAN6 216 aaKnown RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 TBC1D26Q86UD7 250 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 SLC38A6Q8IZM9 456 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 OR4C16Q8NGL9 310 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 OR6Q1Q8NGQ2 317 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 ZNF486Q96H40 463 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 ZNF414Q96IQ9 312 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 MS4A10Q96PG2 267 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 SPIN2AQ99865 258 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 SPIN2BQ9BPZ2 258 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 AIFM2Q9BRQ8 373 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 DCUN1D5Q9BTE7 237 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 C6orf62Q9GZU0 229 aaPredicted RBP7.03□□□□□ -1.28
HMGN1-201ENST00000288344 C5orf66Q9H5L9 145 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 NDUFA4L2Q9NRX3 87 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
HMGN1-201ENST00000288344 IGHV4OR15-8A0A075B7B6 117 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 A0A087WW49 117 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 IGKV1-5P01602 117 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 TRBV12-3P01733 135 aa7.02□□□□□ -1.28
HMGN1-201ENST00000288344 HSPB1P04792 205 aaKnown RBP7.02□□□□□ -1.28
HMGN1-201ENST00000288344 CTSDP07339 412 aaPredicted RBP7.02□□□□□ -1.28
HMGN1-201ENST00000288344 AREGP15514 252 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms