RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 C1orf174Q8IYL3 243 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 ZNF114Q8NC26 417 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 DERL1Q9BUN8 251 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 LRBAP50851 2863 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 CSMD2Q7Z408 3487 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 NKX6-3A6NJ46 265 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 RAMP3O60896 148 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 SP1P08047 785 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 OR5G3P0C626 314 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 TIMP3P35625 211 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 RPL30P62888 115 aaKnown RBP8.64□□□□□ -1.03
SKA1-201ENST00000285116 VASH2Q86V25 355 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 OR52E5Q8NH55 327 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 RNASE8Q8TDE3 154 aaKnown RBP8.64□□□□□ -1.03
SKA1-201ENST00000285116 OR2D2Q9H210 308 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 IL36BQ9NZH7 164 aa8.64□□□□□ -1.03
SKA1-201ENST00000285116 MED12LQ86YW9 2145 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 DIDO1Q9BTC0 2240 aaKnown RBP8.63□□□□□ -1.03
SKA1-201ENST00000285116 FAM166BA8MTA8 275 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 C9orf172C9J069 976 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 DIRC3C9JPN6 131 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 KLRC4-KLRK1H3BQV0 150 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 HTD2P86397 168 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 SPATA45Q537H7 98 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 STPG4Q8N801 248 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 HES7Q9BYE0 225 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 FBXL7Q9UJT9 491 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 LAMTOR2Q9Y2Q5 125 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 CRYBG3Q68DQ2 2970 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 TRBV9A0A0B4J1U6 114 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 PGPEP1LA6NFU8 196 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 K7EP13 123 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 CCL25O15444 150 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 S1PR2O95136 353 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 GPX1P07203 203 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 G6PCP35575 357 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 CDKN1BP46527 198 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 UBE2G2P60604 165 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 PLGLB1Q02325 96 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 INO80CQ6PI98 192 aaPredicted RBP8.63□□□□□ -1.03
SKA1-201ENST00000285116 Q8N976 141 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 OR1L1Q8NH94 360 aa8.63□□□□□ -1.03
SKA1-201ENST00000285116 PSPNO60542 156 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 HBZP02008 142 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 MEOX1P50221 254 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 HNRNPA3P51991 378 aaKnown RBP8.62□□□□□ -1.03
SKA1-201ENST00000285116 KRTDAPP60985 99 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 TRIP6Q15654 476 aaKnown RBP8.62□□□□□ -1.03
SKA1-201ENST00000285116 C11orf53Q8IXP5 236 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 TXN2Q99757 166 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 CLN8Q9UBY8 286 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 TACC2O95359 2948 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 CSMD1Q96PZ7 3565 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 ITPR1Q14643 2758 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 TRBV20OR9-2A0A075B6H5 130 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.62□□□□□ -1.03
SKA1-201ENST00000285116 C15orf62A8K5M9 175 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 C17orf98A8MV24 154 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 DLL1O00548 723 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 FCN1O00602 326 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 CDIPTO14735 213 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 IGLC2P0DOY2 106 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 RPP30P78346 268 aaKnown RBP8.62□□□□□ -1.03
SKA1-201ENST00000285116 CR1LQ2VPA4 569 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 Q6ZN92 141 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 H2BFWTQ7Z2G1 175 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 OR1L6Q8NGR2 347 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 STARD4Q96DR4 205 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 COQ2Q96H96 371 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 QTRT1Q9BXR0 403 aaKnown RBP8.62□□□□□ -1.03
SKA1-201ENST00000285116 PKD1L2Q7Z442 2459 aa8.62□□□□□ -1.03
SKA1-201ENST00000285116 ZG16O60844 167 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 HYPMO75409 117 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 TOMM40O96008 361 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 ADH4P08319 380 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 OPRK1P41145 380 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 UBE2V1Q13404 147 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 ACP7Q6ZNF0 438 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 KLHDC1Q8N7A1 406 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 CXXC4Q9H2H0 198 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 SAA2-SAA4A0A096LPE2 208 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 A0A1W2PPV4 95 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 DEFA4P12838 97 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 CD59P13987 128 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 TGFBR3Q03167 851 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 GUSBP1Q15486 140 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 C1orf162Q8NEQ5 155 aaPredicted RBP8.61□□□□□ -1.03
SKA1-201ENST00000285116 OCC1Q8TAD7 63 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 NINJ1Q92982 152 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 TMEM204Q9BSN7 226 aa8.61□□□□□ -1.03
SKA1-201ENST00000285116 YLPM1P49750 1951 aaKnown RBP8.61□□□□□ -1.03
SKA1-201ENST00000285116 PRSS46E5RG02 174 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 F2Z2F3 143 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 ZNF253O75346 499 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 LGALS4P56470 323 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 PSG7Q13046 419 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 KRTCAP3Q53RY4 240 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 SPATA46Q5T0L3 261 aa8.6□□□□□ -1.03
SKA1-201ENST00000285116 OR2D3Q8NGH3 330 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms