RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 PUSL1Q8N0Z8 303 aaKnown RBP11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 VSIG8P0DPA2 414 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 DOCK8Q8NF50 2099 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 IGHV5-10-1A0A0J9YXX1 117 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 CYP2G1PQ6ZSU1 146 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 TMEM91Q6ZNR0 172 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 FMC1Q96HJ9 113 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 ELOVL5Q9NYP7 299 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 CDC42EP2O14613 210 aa11.32□□□□□ -0.6
SMARCA5-201ENST00000283131 CBLN1P23435 193 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 TBR1Q16650 682 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 ITGB1BP1O14713 200 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 MOSP00540 346 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 NBEAP1P0C6P0 100 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 COQ2Q96H96 371 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 NHP2Q9NX24 153 aaKnown RBP11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 GATAD1Q8WUU5 269 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 GPR146Q96CH1 333 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 WDR54Q9H977 334 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 VDAC2P45880 294 aaPredicted RBP11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 MRAPQ8TCY5 172 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 PTGDSP41222 190 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 OVOL2Q9BRP0 275 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 KLF12Q9Y4X4 402 aa11.31□□□□□ -0.6
SMARCA5-201ENST00000283131 EFNB1P98172 346 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 CRYGNQ8WXF5 182 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 ARPC1AQ92747 370 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 FBXL7Q9UJT9 491 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 RGPD8O14715 1765 aaPredicted RBP11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 OR13A1Q8NGR1 328 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 TMEM174Q8WUU8 243 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 LOXL4Q96JB6 756 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 ERG28Q9UKR5 140 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 SCN5AQ14524 2016 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 JPT1Q9UK76 154 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 NOTCH3Q9UM47 2321 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 ZNHIT1O43257 154 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 LHFPL4Q7Z7J7 247 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 ST6GALNAC6Q969X2 333 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 SIRT4Q9Y6E7 314 aaPredicted RBP11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 CXorf51AA0A1B0GTR3 108 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 H3BUT2 72 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 DPM2O94777 84 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 GCHFRP30047 84 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 LTBRP36941 435 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 C1QL3Q5VWW1 255 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 FOXA2Q9Y261 457 aaPredicted RBP11.3□□□□□ -0.6
SMARCA5-201ENST00000283131 ZNF729A6NN14 1252 aaPredicted RBP11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 GFRA3O60609 400 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 LEAP2Q969E1 77 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 SHISA4Q96DD7 197 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 KLK13Q9UKR3 277 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 PGLYRP1O75594 196 aaPredicted RBP11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 GLIPR1P48060 266 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 ZNF646O15015 1829 aaPredicted RBP11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 WNK2Q9Y3S1 2297 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 MUC21A0A0G2JKD1 596 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 MUC21A0A140T8X8 626 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 B9A039 149 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 DUSP14O95147 198 aaKnown RBP11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 ESDP10768 282 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 TIMM23BQ5SRD1 257 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 MUC21Q5SSG8 566 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 FAM168AQ92567 244 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 FNDC4Q9H6D8 234 aaPredicted RBP11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 CACNA1BQ00975 2339 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 DMRT1Q9Y5R6 373 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 H0YL77 283 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 TNFRSF6BO95407 300 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 IL11P20809 199 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 FAM27BQ5VT28 67 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 ZNF826PQ6ZT77 177 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 CIARTQ8N365 385 aaPredicted RBP11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 ZG16O60844 167 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 PPP1R27Q86WC6 154 aa11.29□□□□□ -0.6
SMARCA5-201ENST00000283131 PCOLCEQ15113 449 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 CLEC19AQ6UXS0 136 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 LINC01555Q8NAE3 123 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 ZNF250P15622 560 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 C8orf46Q8TAG6 207 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 H3BMM0 161 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 NR2C2APQ86WQ0 139 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 UBE2WQ96B02 151 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 MED12Q93074 2177 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 GFI1BQ5VTD9 330 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 SCARF2Q96GP6 870 aaPredicted RBP11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 HS3ST3B1Q9Y662 390 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 HOXB1P14653 301 aaPredicted RBP11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 PSG4Q00888 419 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 ASCL2Q99929 193 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 XAF1Q6GPH4 301 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 FAM60AQ9NP50 221 aa11.28□□□□□ -0.6
SMARCA5-201ENST00000283131 TNFRSF12AQ9NP84 129 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms