RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SSX7Q7RTT5 188 aa16.98■□□□□ 0.31
YBX3-202ENST00000279550 SUN5Q8TC36 379 aa16.98■□□□□ 0.31
YBX3-202ENST00000279550 CLCC1Q96S66 551 aa16.98■□□□□ 0.31
YBX3-202ENST00000279550 H7C2Y5 167 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 NDUFS8O00217 210 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 MDKP21741 143 aaPredicted RBP16.97■□□□□ 0.31
YBX3-202ENST00000279550 ELLP55199 621 aaPredicted RBP16.97■□□□□ 0.31
YBX3-202ENST00000279550 FAM71F2Q6NXP2 309 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 CLEC2AQ6UVW9 174 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 LFNGQ8NES3 379 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 C10orf105Q8TEF2 133 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 TMEM186Q96B77 213 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 PIMREGQ9BSJ6 248 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 NKX6-2Q9C056 277 aaPredicted RBP16.97■□□□□ 0.31
YBX3-202ENST00000279550 EIF5A2Q9GZV4 153 aaKnown RBP16.97■□□□□ 0.31
YBX3-202ENST00000279550 OR51B2Q9Y5P1 312 aa16.97■□□□□ 0.31
YBX3-202ENST00000279550 PRSS46E5RG02 174 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 LY86O95711 162 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 PPT1P50897 306 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 PEA15Q15121 130 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 TMEM177Q53S58 311 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 CENPVQ7Z7K6 275 aaPredicted RBP16.96■□□□□ 0.31
YBX3-202ENST00000279550 C8orf46Q8TAG6 207 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 SFT2D1Q8WV19 159 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 SPG11Q96JI7 2443 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 RARRES2Q99969 163 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 SSBP3Q9BWW4 388 aaPredicted RBP16.96■□□□□ 0.31
YBX3-202ENST00000279550 HIPK2Q9H2X6 1198 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 TIMM9Q9Y5J7 89 aa16.96■□□□□ 0.31
YBX3-202ENST00000279550 PPIAL4CA0A0B4J2A2 164 aa16.96■□□□□ 0.3
YBX3-202ENST00000279550 A0A1B0GW64 132 aa16.96■□□□□ 0.3
YBX3-202ENST00000279550 C22orf46C9J442 243 aa16.96■□□□□ 0.3
YBX3-202ENST00000279550 DNASE2O00115 360 aaPredicted RBP16.96■□□□□ 0.3
YBX3-202ENST00000279550 IGHV2-5P01817 119 aa16.96■□□□□ 0.3
YBX3-202ENST00000279550 PPIAL4GP0DN37 164 aa16.96■□□□□ 0.3
YBX3-202ENST00000279550 M6PRP20645 277 aa16.96■□□□□ 0.3
YBX3-202ENST00000279550 ACSM6Q6P461 480 aa16.96■□□□□ 0.3
YBX3-202ENST00000279550 OSR1Q8TAX0 266 aaPredicted RBP16.96■□□□□ 0.3
YBX3-202ENST00000279550 PRNDQ9UKY0 176 aa16.96■□□□□ 0.3
YBX3-202ENST00000279550 MALRD1Q5VYJ5 2156 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 IGHV2-26A0A0B4J1V2 119 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 FAM74A7A6NL05 159 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 KBTBD11O94819 623 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 RAB2AP61019 212 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 SERF2P84101 59 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 FAM74A3Q4VXF1 159 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 TMEM41BQ5BJD5 291 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 ETV3LQ6ZN32 361 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 SVBPQ8N300 66 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 RCC1LQ96I51 464 aaKnown RBP16.95■□□□□ 0.3
YBX3-202ENST00000279550 HARBI1Q96MB7 349 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 HINT2Q9BX68 163 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 BET1LQ9NYM9 111 aa16.95■□□□□ 0.3
YBX3-202ENST00000279550 ASH1LQ9NR48 2969 aaKnown RBP16.95■□□□□ 0.3
YBX3-202ENST00000279550 NUPL2O15504 423 aaKnown RBP16.94■□□□□ 0.3
YBX3-202ENST00000279550 EIF3GO75821 320 aaKnown RBP eCLIP16.94■□□□□ 0.3
YBX3-202ENST00000279550 IGKV1D-33P01593 117 aa16.94■□□□□ 0.3
YBX3-202ENST00000279550 IGKV1-33P01594 117 aa16.94■□□□□ 0.3
YBX3-202ENST00000279550 NPBWR1P48145 328 aa16.94■□□□□ 0.3
YBX3-202ENST00000279550 TGIF2LXQ8IUE1 241 aa16.94■□□□□ 0.3
YBX3-202ENST00000279550 LY6G5BQ8NDX9 201 aa16.94■□□□□ 0.3
YBX3-202ENST00000279550 CLDND2Q8NHS1 167 aa16.94■□□□□ 0.3
YBX3-202ENST00000279550 TEX50A0A1B0GTY4 177 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 BTBD17A6NE02 478 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 IGLV1-47P01700 117 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 OPN1MWP04001 364 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 OPN1MW2P0DN77 364 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 OPN1MW3P0DN78 364 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 RPP30P78346 268 aaKnown RBP16.93■□□□□ 0.3
YBX3-202ENST00000279550 Q8N7P7 452 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 LHX4Q969G2 390 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 PBDC1Q9BVG4 233 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 KIAA1456Q9P272 454 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 GCN1Q92616 2671 aaKnown RBP16.93■□□□□ 0.3
YBX3-202ENST00000279550 TRAV1-1A0A0B4J248 108 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 RBFOX3A6NFN3 312 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 VWC2LB2RUY7 222 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 COX7A1P24310 79 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 DSCR9P59020 149 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 LMO4P61968 165 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 LCN15Q6UWW0 184 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 PDPNQ86YL7 162 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 MBD3L1Q8WWY6 194 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 FLYWCH2Q96CP2 140 aaKnown RBP16.93■□□□□ 0.3
YBX3-202ENST00000279550 NPCDR1Q9BY65 106 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 BEX4Q9NWD9 120 aaPredicted RBP16.93■□□□□ 0.3
YBX3-202ENST00000279550 WDR83OSQ9Y284 106 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 WASHC3Q9Y3C0 194 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 VPS13CQ709C8 3753 aa16.93■□□□□ 0.3
YBX3-202ENST00000279550 NBPF19A0A087WUL8 3843 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 IGHV4-30-2A0A087WSY4 118 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 CA2P00918 260 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 IGLV2-23P01705 113 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 HBE1P02100 147 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 PRCDQ00LT1 54 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 HAGHQ16775 308 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 HLA-DRB5Q30154 266 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 RITA1Q96K30 269 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 ONECUT1Q9UBC0 465 aa16.92■□□□□ 0.3
YBX3-202ENST00000279550 ZNF257Q9Y2Q1 563 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms