RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 GAGE1Q13065 139 aa11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 SPATA45Q537H7 98 aa11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 VAX1Q5SQQ9 334 aa11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 UTF1Q5T230 341 aa11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 H2BFWTQ7Z2G1 175 aa11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 KIR3DL3Q8N743 410 aa11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 PTX4Q96A99 478 aa11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 TMEM45BQ96B21 275 aa11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 TNRC6BQ9UPQ9 1833 aaKnown RBP11.84□□□□□ -0.51
TNFRSF11A-201ENST00000269485 SPINT2O43291 252 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PLAUP00749 431 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CCL3L1P16619 93 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CDKN1AP38936 164 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PSENENQ9NZ42 101 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 C12orf77C9JDV5 145 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CTSDP07339 412 aaPredicted RBP11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 ZNF439Q8NDP4 499 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 RNF2Q99496 336 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 SLC25A22Q9H936 323 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 ZNF586Q9NXT0 402 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 MPC1Q9Y5U8 109 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 LRP5LA4QPB2 252 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CLEC18AA5D8T8 446 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 H0Y8G0 127 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 BSPH1Q075Z2 132 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 SMIM21Q3B7S5 101 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PRR31Q5SQ13 230 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 Q6ZPA2 131 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CLEC18CQ8NCF0 446 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PLEKHF2Q9H8W4 249 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 Q9N2K0 584 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 OR6C3Q9NZP0 311 aa11.83□□□□□ -0.52
TNFRSF11A-201ENST00000269485 DIRC3C9JPN6 131 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PGLYRP1O75594 196 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 GZMHP20718 246 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 AMTP48728 403 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 SRSF4Q08170 494 aaKnown RBP11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 RBMXL3Q8N7X1 1067 aaKnown RBP11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 ZCCHC14Q8WYQ9 949 aaKnown RBP11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 GCM1Q9NP62 436 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 A0A087WWC5 75 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 A8MXE2 369 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 B4DEV8 164 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CRYABP02511 175 aaKnown RBP11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PNRC1Q12796 327 aaPredicted RBP11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PLGLAQ15195 96 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 Q6ZR03 302 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 OR5AU1Q8NGC0 362 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 ST6GALNAC6Q969X2 333 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 SCRT1Q9BWW7 348 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 OR2W1Q9Y3N9 320 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 S4R3C0 116 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 OR5B21A6NL26 309 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 S1PR2O95136 353 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 MSMPQ1L6U9 139 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 MANBALQ9NQG1 85 aa11.82□□□□□ -0.52
TNFRSF11A-201ENST00000269485 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 FBLN7Q53RD9 439 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 FOXL2NBQ6ZUU3 175 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 GPR146Q96CH1 333 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 LINC00470Q9BZP3 86 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 SAP30LQ9HAJ7 183 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 TMEM30CPA0ZSE6 113 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 C17orf98A8MV24 154 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 C16orf97H3BN30 126 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 IL24Q13007 206 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 HES1Q14469 280 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 FAM89BQ8N5H3 189 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 OR8G5Q8NG78 346 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 GNPNAT1Q96EK6 184 aaPredicted RBP11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 LAMTOR2Q9Y2Q5 125 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CELSR1Q9NYQ6 3014 aa11.81□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CRYM-AS1A6NIL9 109 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 HSBP1L1C9JCN9 74 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 K7ERU9 68 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 MRPL30Q8TCC3 161 aaKnown RBP11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 ACY3Q96HD9 319 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 TNFRSF19Q9NS68 423 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CFAP46Q8IYW2 2715 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 DRAM1Q8N682 238 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 COL5A1P20908 1838 aaPredicted RBP11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PGPEP1LA6NFU8 196 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 REG1AP05451 166 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CRISP2P16562 243 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 TNFSF4P23510 183 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 TMEM187Q14656 261 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 Q6ZRM9 215 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 OR2D3Q8NGH3 330 aa11.8□□□□□ -0.52
TNFRSF11A-201ENST00000269485 A0A1B0GU03 582 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 TMEM238C9JI98 176 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 INO80CQ6PI98 192 aaPredicted RBP11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 DOLPP1Q86YN1 238 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 VSIRQ9H7M9 311 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 CLCF1Q9UBD9 225 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 NKX6-3A6NJ46 265 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 ZNF737O75373 536 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 F2RP25116 425 aa11.79□□□□□ -0.52
TNFRSF11A-201ENST00000269485 PSMB3P49720 205 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms