RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 MLNRO43193 412 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 S1PR2O95136 353 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 CLDN14O95500 239 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 CAMPP49913 170 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 SPINK9Q5DT21 86 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 TNRC6BQ9UPQ9 1833 aaKnown RBP13.65□□□□□ -0.22
CTCF-201ENST00000264010 PRSS47A8MTI9 375 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 OR7C2O60412 319 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 OR13A1Q8NGR1 328 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 OR4C12Q96R67 309 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 PARLQ9H300 379 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 KCNIP2Q9NS61 270 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 A8MWP6 167 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 SNURFLB1AK76 121 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 FOXC1Q12948 553 aa13.65□□□□□ -0.22
CTCF-201ENST00000264010 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
CTCF-201ENST00000264010 M0QZ24 198 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 FFAR4Q5NUL3 377 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 MBNL2Q5VZF2 373 aaKnown RBP13.64□□□□□ -0.23
CTCF-201ENST00000264010 PRR7Q8TB68 274 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 SNAI2O43623 268 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 LYG1Q8N1E2 194 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 SRD5A3Q9H8P0 318 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 NAT8Q9UHE5 227 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 NBEAQ8NFP9 2946 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 CISD2Q8N5K1 135 aaKnown RBP13.64□□□□□ -0.23
CTCF-201ENST00000264010 OR5B3Q8NH48 314 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 OR4S2Q8NH73 311 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 H1FXQ92522 213 aaKnown RBP13.64□□□□□ -0.23
CTCF-201ENST00000264010 MEGF9Q9H1U4 602 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 JPT1Q9UK76 154 aa13.64□□□□□ -0.23
CTCF-201ENST00000264010 C16orf97H3BN30 126 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 ELOBQ15370 118 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 IGFL2Q6UWQ7 119 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 TAF15Q92804 592 aaKnown RBP eCLIP13.63□□□□□ -0.23
CTCF-201ENST00000264010 UQCR10Q9UDW1 63 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 MBD3L4A6NDZ8 208 aaPredicted RBP13.63□□□□□ -0.23
CTCF-201ENST00000264010 MBD3L3A6NE82 208 aaPredicted RBP13.63□□□□□ -0.23
CTCF-201ENST00000264010 MBD3L5A6NJ08 208 aaPredicted RBP13.63□□□□□ -0.23
CTCF-201ENST00000264010 HSPB1P04792 205 aaKnown RBP13.63□□□□□ -0.23
CTCF-201ENST00000264010 GZMBP10144 247 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 SMAGPQ0VAQ4 97 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 FAM90A1Q86YD7 464 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 MBD3L2Q8NHZ7 208 aaPredicted RBP13.63□□□□□ -0.23
CTCF-201ENST00000264010 PRDM13Q9H4Q3 707 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 SLC25A15Q9Y619 301 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 WT1P19544 449 aaPredicted RBP13.63□□□□□ -0.23
CTCF-201ENST00000264010 IMMP2LQ96T52 175 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 PSMG3Q9BT73 122 aaPredicted RBP13.63□□□□□ -0.23
CTCF-201ENST00000264010 LPAR2Q9HBW0 351 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 RFNGQ9Y644 331 aa13.63□□□□□ -0.23
CTCF-201ENST00000264010 A0A0G2JRQ6 117 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 TFF1P04155 84 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 CSN3P07498 182 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 CCL20P78556 96 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 RTL8BQ17RB0 113 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 OR10G4Q8NGN3 311 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 OR10G9Q8NGN4 311 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 OR10G7Q8NGN6 311 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 TMEM171Q8WVE6 324 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 ADTRPQ96IZ2 230 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 SEBOXQ9HB31 216 aaPredicted RBP13.62□□□□□ -0.23
CTCF-201ENST00000264010 C17orf98A8MV24 154 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 CIDEAO60543 219 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 IGKV1-5P01602 117 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 MRPS11P82912 194 aaKnown RBP13.62□□□□□ -0.23
CTCF-201ENST00000264010 Q6ZPA2 131 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 Q6ZVH6 145 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 ASPMQ8IZT6 3477 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 HRASP01112 189 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 TDGF1P3P51864 188 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 HLA-DRB5Q30154 266 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 DCTN5Q9BTE1 182 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 GAL3ST2Q9H3Q3 398 aa13.62□□□□□ -0.23
CTCF-201ENST00000264010 hADV38S2A0JD32 116 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 PAGE4O60829 102 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 MRGPRGQ86SM5 289 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 RPRMQ9NS64 109 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 CALYQ9NYX4 217 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.61□□□□□ -0.23
CTCF-201ENST00000264010 FOLR2P14207 255 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 GCSAMQ8N6F7 178 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 ZNF525Q8N782 197 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 DPF1Q92782 380 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 VAX2Q9UIW0 290 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 AARDQ4LEZ3 155 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 FAM169BQ8N8A8 192 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 NUDT10Q8NFP7 164 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 SPTA1P02549 2419 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 OTOGLQ3ZCN5 2332 aa13.61□□□□□ -0.23
CTCF-201ENST00000264010 M0R2Z0 102 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 BCL2P10415 239 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 LMO1P25800 156 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 TPTE2P1Q5T6R2 138 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 NIT1Q86X76 327 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 FAM57AQ8TBR7 257 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 RNF2Q99496 336 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 CHRDL1Q9BU40 450 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 WDR61Q9GZS3 305 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms