RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CHTOPQ9Y3Y2 248 aaKnown RBP22.29■■□□□ 1.16
SMARCD3-201ENST00000262188 TGOLN2O43493 480 aa22.29■■□□□ 1.16
SMARCD3-201ENST00000262188 ZNF25P17030 456 aaPredicted RBP22.29■■□□□ 1.16
SMARCD3-201ENST00000262188 BTNL8Q6UX41 500 aa22.29■■□□□ 1.16
SMARCD3-201ENST00000262188 ITGB1BP1O14713 200 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 GATA3P23771 443 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 SULT1A1P50225 295 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 UCP3P55916 312 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 KLF17Q5JT82 389 aaPredicted RBP22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 ZNF645Q8N7E2 425 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 ZNF596Q8TC21 504 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 RNASEH2CQ8TDP1 164 aaKnown RBP22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 PPP1R1CQ8WVI7 109 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 TMEM230Q96A57 120 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 C18orf12Q96KH6 178 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 PRO1933Q9H354 126 aa22.28■■□□□ 1.16
SMARCD3-201ENST00000262188 ODF3BA8MYP8 253 aa22.27■■□□□ 1.16
SMARCD3-201ENST00000262188 SNRNP70P08621 437 aaKnown RBP22.27■■□□□ 1.16
SMARCD3-201ENST00000262188 AKR1C4P17516 323 aa22.27■■□□□ 1.16
SMARCD3-201ENST00000262188 G0S2P27469 103 aa22.27■■□□□ 1.16
SMARCD3-201ENST00000262188 HAGHQ16775 308 aa22.27■■□□□ 1.16
SMARCD3-201ENST00000262188 M0R143 59 aa22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 RAB7AP51149 207 aa22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 PRRX1P54821 245 aa22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 PIGPP57054 158 aa22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 UBE2MP61081 183 aaKnown RBP22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 NCR3LG1Q68D85 454 aa22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 PIP4P2Q8N4L2 257 aa22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 LINC00311Q8N616 119 aa22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 SLC2A9Q9NRM0 540 aa22.27■■□□□ 1.15
SMARCD3-201ENST00000262188 BUB1B-PAK6H3BSN5 160 aa22.26■■□□□ 1.15
SMARCD3-201ENST00000262188 JOSD1Q15040 202 aaPredicted RBP22.26■■□□□ 1.15
SMARCD3-201ENST00000262188 IL17RELQ6ZVW7 336 aa22.26■■□□□ 1.15
SMARCD3-201ENST00000262188 ZDHHC22Q8N966 263 aa22.26■■□□□ 1.15
SMARCD3-201ENST00000262188 LYPD6BQ8NI32 183 aa22.26■■□□□ 1.15
SMARCD3-201ENST00000262188 ACTR3CQ9C0K3 210 aaPredicted RBP22.26■■□□□ 1.15
SMARCD3-201ENST00000262188 HRH4Q9H3N8 390 aa22.26■■□□□ 1.15
SMARCD3-201ENST00000262188 CYTL1Q9NRR1 136 aa22.26■■□□□ 1.15
SMARCD3-201ENST00000262188 CTSDP07339 412 aaPredicted RBP22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 ABCA11PQ4W5N1 156 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 C8orf31Q8N9H6 132 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 C14orf166Q9Y224 244 aaKnown RBP22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 M0R1X1 148 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 RAB29O14966 203 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 ADAP1O75689 374 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 UBE2E1P51965 193 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 DYNAPQ8N1N2 210 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 TMED6Q8WW62 240 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 AKR1E2Q96JD6 320 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 PRR13Q9NZ81 148 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 HILPDAQ9Y5L2 63 aa22.25■■□□□ 1.15
SMARCD3-201ENST00000262188 RPL30P62888 115 aaKnown RBP22.24■■□□□ 1.15
SMARCD3-201ENST00000262188 KHDC3LQ587J8 217 aa22.24■■□□□ 1.15
SMARCD3-201ENST00000262188 OR51H1Q8NH63 302 aa22.24■■□□□ 1.15
SMARCD3-201ENST00000262188 ST6GALNAC6Q969X2 333 aa22.24■■□□□ 1.15
SMARCD3-201ENST00000262188 TMEM208Q9BTX3 173 aa22.24■■□□□ 1.15
SMARCD3-201ENST00000262188 SMCO3A2RU48 225 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 J3QLI3 93 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 SAA4P35542 130 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 CLINT1Q14677 625 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 ISOC2Q96AB3 205 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 RRNAD1Q96FB5 475 aaKnown RBP22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 IGHV1-69DA0A0B4J2H0 117 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 PGLYRP1O75594 196 aaPredicted RBP22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 IGHV1-69P01742 117 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 ECI1P42126 302 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 CYCSP99999 105 aaKnown RBP22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 TBC1D26Q86UD7 250 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 SONP18583 2426 aaKnown RBP22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 HIVEP1P15822 2718 aa22.23■■□□□ 1.15
SMARCD3-201ENST00000262188 LINC00473A8K010 186 aa22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 NPFFO15130 113 aa22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 CD5LO43866 347 aa22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 HTR1DP28221 377 aa22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 SULT1A2P50226 295 aa22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 EIF4EBP1Q13541 118 aaPredicted RBP22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 RTN4IP1Q8WWV3 396 aaPredicted RBP22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 AJUBAQ96IF1 538 aa22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 MRPL20Q9BYC9 149 aaKnown RBP22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 YAE1D1Q9NRH1 226 aa22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 FBXO7Q9Y3I1 522 aa22.22■■□□□ 1.15
SMARCD3-201ENST00000262188 M0R036 132 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 TAAR5O14804 337 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 PPP1R1AQ13522 171 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 SP6Q3SY56 376 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 GPR157Q5UAW9 335 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 ZNF833PQ6ZTB9 187 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 C22orf15Q8WYQ4 148 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 LY6LH3BQJ8 138 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 RPS10P46783 165 aaKnown RBP22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 SCGB3A2Q96PL1 93 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 SMDT1Q9H4I9 107 aa22.21■■□□□ 1.15
SMARCD3-201ENST00000262188 PSMB6P28072 239 aa22.2■■□□□ 1.14
SMARCD3-201ENST00000262188 LGALS4P56470 323 aa22.2■■□□□ 1.14
SMARCD3-201ENST00000262188 SUPT4H1P63272 117 aaKnown RBP22.2■■□□□ 1.14
SMARCD3-201ENST00000262188 AKR1C8PQ5T2L2 129 aa22.2■■□□□ 1.14
SMARCD3-201ENST00000262188 SLC25A42Q86VD7 318 aa22.2■■□□□ 1.14
SMARCD3-201ENST00000262188 CMTM1Q8IZ96 169 aa22.2■■□□□ 1.14
SMARCD3-201ENST00000262188 IGHV3-72A0A0B4J1Y9 119 aa22.19■■□□□ 1.14
SMARCD3-201ENST00000262188 EREGO14944 169 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms