RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 HAPLN4Q86UW8 402 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 SLC25A45Q8N413 288 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 COL11A1P12107 1806 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-201ENST00000261556 A0A0A6YYD4 124 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 A1L4Q6 167 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 PSG2P11465 335 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 RPL8P62917 257 aaKnown RBP11.04□□□□□ -0.64
TMEM260-201ENST00000261556 C3AR1Q16581 482 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 PIGYQ3MUY2 71 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 SHISA2Q6UWI4 295 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 H2BFWTQ7Z2G1 175 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 HIF1ANQ9NWT6 349 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 PTPRDP23468 1912 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 FAM90A27PA6NNH2 459 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 KIR3DS1Q14943 382 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 TNXAQ16473 311 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 SAMD5Q5TGI4 173 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 FAM169BQ8N8A8 192 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 ZNF764Q96H86 408 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-201ENST00000261556 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 YTHDF2Q9Y5A9 579 aaKnown RBP11.04□□□□□ -0.64
TMEM260-201ENST00000261556 C4orf51C9J302 202 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 OSR2Q8N2R0 312 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 TEX29Q8N6K0 151 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 HES7Q9BYE0 225 aa11.04□□□□□ -0.64
TMEM260-201ENST00000261556 ARID2Q68CP9 1835 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 ZFHX2Q9C0A1 2572 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-201ENST00000261556 MTCL1Q9Y4B5 1905 aaKnown RBP11.03□□□□□ -0.64
TMEM260-201ENST00000261556 TMSB15BA0A087X1C1 80 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 GPR12P47775 334 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 PLXNB2O15031 1838 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 DOCK6Q96HP0 2047 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 HBZP02008 142 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 BGLAPP02818 100 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 SCGB1C2P0DMR2 95 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 ZNF418Q8TF45 676 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-201ENST00000261556 OR5P3Q8WZ94 311 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 RCHY1Q96PM5 261 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 IGKV1-8A0A0C4DH67 115 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
TMEM260-201ENST00000261556 GNG3P63215 75 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 RBMXL3Q8N7X1 1067 aaKnown RBP11.03□□□□□ -0.64
TMEM260-201ENST00000261556 TMEM45BQ96B21 275 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 ZNF501Q96CX3 271 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-201ENST00000261556 S1PR3Q99500 378 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 RNASE7Q9H1E1 156 aaKnown RBP11.03□□□□□ -0.64
TMEM260-201ENST00000261556 FZR1Q9UM11 496 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 ACACBO00763 2458 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 FAM208BQ5VWN6 2430 aa11.03□□□□□ -0.64
TMEM260-201ENST00000261556 PHF3Q92576 2039 aaKnown RBP11.02□□□□□ -0.64
TMEM260-201ENST00000261556 AMY1AP04745 511 aa11.02□□□□□ -0.64
TMEM260-201ENST00000261556 SSTR5P35346 364 aa11.02□□□□□ -0.64
TMEM260-201ENST00000261556 MAGEA5P43359 124 aa11.02□□□□□ -0.64
TMEM260-201ENST00000261556 OR10X1Q8NGY0 326 aa11.02□□□□□ -0.64
TMEM260-201ENST00000261556 SSUH2Q9Y2M2 353 aa11.02□□□□□ -0.64
TMEM260-201ENST00000261556 CUL9Q8IWT3 2517 aa11.02□□□□□ -0.64
TMEM260-201ENST00000261556 FAM181BA6NEQ2 426 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 C21orf140B9A014 251 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 LGALS7P47929 136 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 RSPO4Q2I0M5 234 aaPredicted RBP11.02□□□□□ -0.65
TMEM260-201ENST00000261556 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.65
TMEM260-201ENST00000261556 CYSLTR1Q9Y271 337 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 FAM87AP0C7U9 286 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 CD1BP29016 333 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 TMEM95Q3KNT9 176 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 COX19Q49B96 90 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 FAM166AQ6J272 317 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 LHFPL1Q86WI0 220 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 RFESDQ8TAC1 157 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 NPVFQ9HCQ7 196 aa11.02□□□□□ -0.65
TMEM260-201ENST00000261556 NHP2Q9NX24 153 aaKnown RBP11.02□□□□□ -0.65
TMEM260-201ENST00000261556 NYNRINQ9P2P1 1898 aaKnown RBP11.02□□□□□ -0.65
TMEM260-201ENST00000261556 C19orf67A6NJJ6 358 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 SH2D7A6NKC9 451 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-201ENST00000261556 EFEMP2O95967 443 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
TMEM260-201ENST00000261556 DEFB125Q8N687 156 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 TSKUQ8WUA8 353 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 ASAH2BP0C7U1 165 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 SEC11AP67812 179 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 KHDC1LQ5JSQ8 128 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 FAM222BQ8WU58 562 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 SPSB1Q96BD6 273 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 KLF7O75840 302 aaPredicted RBP11.01□□□□□ -0.65
TMEM260-201ENST00000261556 LIPFP07098 398 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 IGLC1P0CG04 106 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 FOXL1Q12952 345 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 C9orf40Q8IXQ3 194 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 SLC25A40Q8TBP6 338 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 UCN2Q96RP3 112 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 TNFRSF1AP19438 455 aa11.01□□□□□ -0.65
TMEM260-201ENST00000261556 ARL14EPLP0DKL9 152 aa11□□□□□ -0.65
TMEM260-201ENST00000261556 CT45A6P0DMU7 189 aa11□□□□□ -0.65
TMEM260-201ENST00000261556 CT45A5P0DMU8 189 aa11□□□□□ -0.65
TMEM260-201ENST00000261556 CT45A7P0DMV0 189 aa11□□□□□ -0.65
TMEM260-201ENST00000261556 IGFBP3P17936 291 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms