RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 LYZL2Q7Z4W2 148 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 HIST1H2BAQ96A08 127 aa11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 TCF20Q9UGU0 1960 aaKnown RBP11.18□□□□□ -0.62
PRPF38A-201ENST00000257181 PRR30Q53SZ7 412 aaPredicted RBP11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 CADM3Q8N126 398 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 SAP30O75446 220 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 HLA-DQB1P01920 261 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 SLC25A48Q6ZT89 311 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 HDHD3Q9BSH5 251 aaPredicted RBP11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 MYOFQ9NZM1 2061 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 ITLN2Q8WWU7 325 aaPredicted RBP11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 SRSF12Q8WXF0 261 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 DYRK2Q92630 601 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 GPR146Q96CH1 333 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 NRN1Q9NPD7 142 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 TDRD6O60522 2096 aaKnown RBP11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 H3BUX3 64 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 MPZP25189 248 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 ZNF429Q86V71 674 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 IL17DQ8TAD2 202 aa11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 COL4A4P53420 1690 aaPredicted RBP11.17□□□□□ -0.62
PRPF38A-201ENST00000257181 IGKV3-7A0A075B6H7 116 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 IL4P05112 153 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 RCC1P18754 421 aaPredicted RBP11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 DHRS11Q6UWP2 260 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 NCCRP1Q6ZVX7 275 aaPredicted RBP11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 UBE2DNLQ8IWF7 75 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 SIGLECL1Q8N7X8 197 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 SLC35B3Q9H1N7 401 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 PAX8Q06710 450 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 GAFA1Q96PS6 74 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 SRSF10O75494 262 aaKnown RBP11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 PTBP3O95758 552 aaKnown RBP11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 TMEM255AQ5JRV8 349 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 ZNF525Q8N782 197 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 PRSS3P2Q8NHM4 247 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 SDF2L1Q9HCN8 221 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 RCC2Q9P258 522 aaKnown RBP11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 PKIGQ9Y2B9 76 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 FGF16O43320 207 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 SULT1A2P50226 295 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 LYRM7Q5U5X0 104 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 PHLDA3Q9Y5J5 127 aa11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 HELZP42694 1942 aaKnown RBP11.16□□□□□ -0.62
PRPF38A-201ENST00000257181 APOC4P55056 127 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 CX3CL1P78423 397 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 WNT10AQ9GZT5 417 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 SAA2-SAA4A0A096LPE2 208 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 TEX48A0A1B0GUV7 120 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 A0A1B0GW15 77 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 SAA2P0DJI9 122 aaPredicted RBP11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 TMPRSS5Q9H3S3 457 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 ZMAT4Q9H898 229 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 CROCCQ5TZA2 2017 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 EFNA2O43921 213 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 ELANEP08246 267 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 MGPP08493 103 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 FAM157CP0CG43 387 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 NAT1P18440 290 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 RHOGP84095 191 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 SPATA31B1PQ5VZV4 182 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 OR5AU1Q8NGC0 362 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 IGHV1-3A0A0C4DH29 117 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 C15orf61A6NNL5 157 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 CLDN34H7C241 214 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 UCP1P25874 307 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 TMEM42Q69YG0 159 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 OR10G8Q8NGN5 311 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 ANGPTL6Q8NI99 470 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 FAM210BQ96KR6 192 aa11.15□□□□□ -0.62
PRPF38A-201ENST00000257181 A0A1W2PRX2 142 aa11.15□□□□□ -0.63
PRPF38A-201ENST00000257181 BUB1B-PAK6H3BSN5 160 aa11.15□□□□□ -0.63
PRPF38A-201ENST00000257181 CRYBA2P53672 197 aa11.15□□□□□ -0.63
PRPF38A-201ENST00000257181 TEX36Q5VZQ5 186 aa11.15□□□□□ -0.63
PRPF38A-201ENST00000257181 CLEC19AQ6UXS0 136 aa11.15□□□□□ -0.63
PRPF38A-201ENST00000257181 RELL2Q8NC24 303 aaPredicted RBP11.15□□□□□ -0.63
PRPF38A-201ENST00000257181 KAAG1Q9UBP8 84 aa11.15□□□□□ -0.63
PRPF38A-201ENST00000257181 ZFC3H1O60293 1989 aaKnown RBP11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 IGKV1D-43A0A0B4J1Z2 117 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 OR1P1Q8NH06 330 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 FAM215AQ9Y5M1 114 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 GBF1Q92538 1859 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 LINC01549A6NIU2 74 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 CFHR2P36980 270 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 EFNB2P52799 333 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 C2CD4CQ8TF44 421 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 SCN3AQ9NY46 2000 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 HTN1P15515 57 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 Q6AWC8 147 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 ABCA7Q8IZY2 2146 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 DUX3Q96PT4 197 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 SPRY4Q9C004 299 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 IGLV3-9A0A075B6K5 115 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 CA2P00918 260 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 ASIPP42127 132 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 SSTP61278 116 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms