RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 PRB2P02812 416 aaPredicted RBP19.37■□□□□ 0.69
LSM7-201ENST00000252622 HSPB1P04792 205 aaKnown RBP19.37■□□□□ 0.69
LSM7-201ENST00000252622 RND3P61587 244 aa19.37■□□□□ 0.69
LSM7-201ENST00000252622 FYTTD1Q96QD9 318 aaKnown RBP19.37■□□□□ 0.69
LSM7-201ENST00000252622 ZNF257Q9Y2Q1 563 aa19.37■□□□□ 0.69
LSM7-201ENST00000252622 A0A1B0GW64 132 aa19.36■□□□□ 0.69
LSM7-201ENST00000252622 FABP12A6NFH5 140 aa19.36■□□□□ 0.69
LSM7-201ENST00000252622 HMX3A6NHT5 357 aa19.36■□□□□ 0.69
LSM7-201ENST00000252622 NPIPB5A8MRT5 1133 aa19.36■□□□□ 0.69
LSM7-201ENST00000252622 E7EUB6 86 aa19.36■□□□□ 0.69
LSM7-201ENST00000252622 PGAM2P15259 253 aa19.36■□□□□ 0.69
LSM7-201ENST00000252622 TERB2Q8NHR7 220 aa19.36■□□□□ 0.69
LSM7-201ENST00000252622 AURKAIP1Q9NWT8 199 aaPredicted RBP19.36■□□□□ 0.69
LSM7-201ENST00000252622 TRBV9A0A0B4J1U6 114 aa19.35■□□□□ 0.69
LSM7-201ENST00000252622 TRAV3A0A0B4J244 114 aa19.35■□□□□ 0.69
LSM7-201ENST00000252622 FAM223BA6NKX1 122 aa19.35■□□□□ 0.69
LSM7-201ENST00000252622 PPP5CP53041 499 aa19.35■□□□□ 0.69
LSM7-201ENST00000252622 C9orf66Q5T8R8 295 aa19.35■□□□□ 0.69
LSM7-201ENST00000252622 FAM223AQ8IWN6 122 aa19.35■□□□□ 0.69
LSM7-201ENST00000252622 SEC14L6B5MCN3 397 aa19.34■□□□□ 0.69
LSM7-201ENST00000252622 RBMXL2O75526 392 aaKnown RBP19.34■□□□□ 0.69
LSM7-201ENST00000252622 AKAIN1P0CW23 69 aa19.34■□□□□ 0.69
LSM7-201ENST00000252622 MYOD1P15172 320 aa19.34■□□□□ 0.69
LSM7-201ENST00000252622 PTBP1P26599 531 aaKnown RBP eCLIP19.34■□□□□ 0.69
LSM7-201ENST00000252622 HOXD3P31249 432 aaPredicted RBP19.34■□□□□ 0.69
LSM7-201ENST00000252622 OR2B8PP59922 312 aa19.34■□□□□ 0.69
LSM7-201ENST00000252622 ZNF45Q02386 682 aa19.34■□□□□ 0.69
LSM7-201ENST00000252622 SCGB2B2Q4G0G5 96 aa19.34■□□□□ 0.69
LSM7-201ENST00000252622 DCUN1D4Q92564 292 aa19.34■□□□□ 0.69
LSM7-201ENST00000252622 COMMD5Q9GZQ3 224 aa19.34■□□□□ 0.69
LSM7-201ENST00000252622 RANGRFQ9HD47 186 aaPredicted RBP19.34■□□□□ 0.69
LSM7-201ENST00000252622 DPPA5A6NC42 116 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 CGB1A6NKQ9 187 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 OVOL1O14753 267 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 KRASP01116 189 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 CRYGCP07315 174 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 RPA2P15927 270 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 ECI1P42126 302 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 SLURP1P55000 103 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 KRTAP10-11P60412 298 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 RHOGP84095 191 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 DEFA5Q01523 94 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 ZNF343Q6P1L6 599 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 ZFAND1Q8TCF1 268 aa19.33■□□□□ 0.68
LSM7-201ENST00000252622 SRSF8Q9BRL6 282 aaKnown RBP19.33■□□□□ 0.68
LSM7-201ENST00000252622 ZMAT5Q9UDW3 170 aaKnown RBP19.33■□□□□ 0.68
LSM7-201ENST00000252622 ANKRD20A5PA0PJZ0 165 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 DISC1C4P0D8 188 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 PRH1P02810 166 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 AREGP15514 252 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 PI3P19957 117 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 PSMB6P28072 239 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 S100A5P33763 92 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 G6PCP35575 357 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 PIGPP57054 158 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 THOC7Q6I9Y2 204 aaKnown RBP19.32■□□□□ 0.68
LSM7-201ENST00000252622 FAAP20Q6NZ36 180 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 NECAP1Q8NC96 275 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 OR4C16Q8NGL9 310 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 DLX4Q92988 240 aaPredicted RBP19.32■□□□□ 0.68
LSM7-201ENST00000252622 AKIP1Q9NQ31 210 aa19.32■□□□□ 0.68
LSM7-201ENST00000252622 H0Y980 276 aa19.31■□□□□ 0.68
LSM7-201ENST00000252622 CTRB1P17538 263 aa19.31■□□□□ 0.68
LSM7-201ENST00000252622 KLK9Q2XQG4 91 aa19.31■□□□□ 0.68
LSM7-201ENST00000252622 CTRB2Q6GPI1 263 aa19.31■□□□□ 0.68
LSM7-201ENST00000252622 OR13C8Q8NGS7 320 aa19.31■□□□□ 0.68
LSM7-201ENST00000252622 MRGPRFQ96AM1 343 aa19.31■□□□□ 0.68
LSM7-201ENST00000252622 QTRT1Q9BXR0 403 aaKnown RBP19.31■□□□□ 0.68
LSM7-201ENST00000252622 KLK9Q9UKQ9 250 aa19.31■□□□□ 0.68
LSM7-201ENST00000252622 V9GYH0 126 aa19.31■□□□□ 0.68
LSM7-201ENST00000252622 DHFRP00374 187 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 IGKV1-39P01597 117 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 IGKV1D-39P04432 117 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 CTSDP07339 412 aaPredicted RBP19.3■□□□□ 0.68
LSM7-201ENST00000252622 ZP3P21754 424 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 INSL3P51460 131 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 SURF2Q15527 256 aaPredicted RBP19.3■□□□□ 0.68
LSM7-201ENST00000252622 CCDC71LQ8N9Z2 235 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 MARCH1Q8TCQ1 289 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 TSC22D3Q99576 134 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 PRRT1Q99946 306 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 COPZ2Q9P299 210 aa19.3■□□□□ 0.68
LSM7-201ENST00000252622 PEF1Q9UBV8 284 aaKnown RBP19.3■□□□□ 0.68
LSM7-201ENST00000252622 IGLC7A0M8Q6 106 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 SNAPC5O75971 98 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 SERPINE2P07093 398 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 ATP5G2Q06055 141 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 C19orf35Q6ZS72 473 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 OR1L8Q8NGR8 309 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 SEC22AQ96IW7 307 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 SLC2A8Q9NY64 477 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 PRNDQ9UKY0 176 aa19.29■□□□□ 0.68
LSM7-201ENST00000252622 ANKRD34BA5PLL1 514 aa19.28■□□□□ 0.68
LSM7-201ENST00000252622 OR2J3O76001 311 aa19.28■□□□□ 0.68
LSM7-201ENST00000252622 EXOSC2Q13868 293 aaKnown RBP19.28■□□□□ 0.68
LSM7-201ENST00000252622 HSD17B13Q7Z5P4 300 aaPredicted RBP19.28■□□□□ 0.68
LSM7-201ENST00000252622 CCDC190Q86UF4 302 aa19.28■□□□□ 0.68
LSM7-201ENST00000252622 MRAPQ8TCY5 172 aa19.28■□□□□ 0.68
LSM7-201ENST00000252622 FANCD2OSQ96PS1 177 aa19.28■□□□□ 0.68
LSM7-201ENST00000252622 THAP7Q9BT49 309 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 229 ms