RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 E7EUB6 86 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 LGALS9O00182 355 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 OR2C1O95371 312 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 FOLR2P14207 255 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 FCGR2CP31995 323 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 PPP5CP53041 499 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 RPL8P62917 257 aaKnown RBP15.92■□□□□ 0.14
NEDD8-201ENST00000250495 MXD1Q05195 221 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 GPHB5Q86YW7 130 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 SECTM1Q8WVN6 248 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 PLEKHA3Q9HB20 300 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 CCL28Q9NRJ3 127 aa15.92■□□□□ 0.14
NEDD8-201ENST00000250495 A0A0A6YYH2 397 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 A6NJ64 397 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 C2orf70A6NJV1 201 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 HIST1H1BP16401 226 aaKnown RBP15.91■□□□□ 0.14
NEDD8-201ENST00000250495 PSMB6P28072 239 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 LINC00322Q6ZN03 302 aaPredicted RBP15.91■□□□□ 0.14
NEDD8-201ENST00000250495 SSX9Q7RTT3 188 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 HOGA1Q86XE5 327 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 OR4A5Q8NH83 315 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 AP3S1Q92572 193 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 FANCD2OSQ96PS1 177 aa15.91■□□□□ 0.14
NEDD8-201ENST00000250495 NDUFB8O95169 186 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 HLA-AP01891 365 aaKnown RBP15.9■□□□□ 0.14
NEDD8-201ENST00000250495 DEFA4P12838 97 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 ARL3P36405 182 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 GUCA2BQ16661 112 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 KLK9Q2XQG4 91 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 FAM106AQ4KMX7 169 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 IDNKQ5T6J7 187 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 CLEC19AQ6UXS0 136 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 CCDC190Q86UF4 302 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 SPAG16Q8N0X2 631 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 GVQW1Q8N7I0 195 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 OR5H6Q8NGV6 325 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 EEF1AKMT3Q96AZ1 226 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 GPHA2Q96T91 129 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 DIABLOQ9NR28 239 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 BET1LQ9NYM9 111 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 KLK9Q9UKQ9 250 aa15.9■□□□□ 0.14
NEDD8-201ENST00000250495 TNFSF12O43508 249 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 PPYP01298 95 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 CD7P09564 240 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 CLEC2LP0C7M8 214 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 AREGP15514 252 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 CTRB1P17538 263 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 HLA-GP17693 338 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 RGS21Q2M5E4 152 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 CTRB2Q6GPI1 263 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 OR4A47Q6IF82 309 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 C19orf35Q6ZS72 473 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 HIPK2Q9H2X6 1198 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 HRASLSQ9HDD0 168 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 ZC4H2Q9NQZ6 224 aa15.89■□□□□ 0.13
NEDD8-201ENST00000250495 A0A1B0GW64 132 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 OR11H12B2RN74 326 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 RBFOX2O43251 390 aaKnown RBP eCLIP15.88■□□□□ 0.13
NEDD8-201ENST00000250495 IGHV3-23P01764 117 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 CBLN1P23435 193 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 CATR1Q13166 79 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 SPANXN2Q5MJ10 180 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 Q6ZNX1 250 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 DEFB125Q8N687 156 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 IL17DQ8TAD2 202 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 SLC25A38Q96DW6 304 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 SLC5A7Q9GZV3 580 aa15.88■□□□□ 0.13
NEDD8-201ENST00000250495 GAR1Q9NY12 217 aaKnown RBP15.88■□□□□ 0.13
NEDD8-201ENST00000250495 TRBV7-1A0A0A6YYK4 115 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 A0A1B0GVG6 124 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 ZNF320A2RRD8 509 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 TMEM127O75204 238 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 HPRT1P00492 218 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 PTHLHP12272 177 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 CBX5P45973 191 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 TAS2R31P59538 309 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 CXorf58Q96LI9 332 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 CCDC140Q96MF4 163 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 AUNIPQ9H7T9 357 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 S4R3C0 116 aa15.87■□□□□ 0.13
NEDD8-201ENST00000250495 IGLV11-55A0A075B6I3 123 aa15.86■□□□□ 0.13
NEDD8-201ENST00000250495 SULT1C2O00338 296 aa15.86■□□□□ 0.13
NEDD8-201ENST00000250495 NQO2P16083 231 aa15.86■□□□□ 0.13
NEDD8-201ENST00000250495 SLC16A13Q7RTY0 426 aa15.86■□□□□ 0.13
NEDD8-201ENST00000250495 GIMAP1Q8WWP7 306 aa15.86■□□□□ 0.13
NEDD8-201ENST00000250495 CCDC32Q9BV29 185 aa15.86■□□□□ 0.13
NEDD8-201ENST00000250495 SRD5A3Q9H8P0 318 aa15.86■□□□□ 0.13
NEDD8-201ENST00000250495 CSMD3Q7Z407 3707 aa15.86■□□□□ 0.13
NEDD8-201ENST00000250495 RBMY1BA6NDE4 496 aaKnown RBP15.85■□□□□ 0.13
NEDD8-201ENST00000250495 RBMY1EA6NEQ0 496 aaKnown RBP15.85■□□□□ 0.13
NEDD8-201ENST00000250495 CGB1A6NKQ9 187 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 UPK1BO75841 260 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 REG1AP05451 166 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 CLEC3BP05452 202 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 RBMY1DP0C7P1 496 aaKnown RBP15.85■□□□□ 0.13
NEDD8-201ENST00000250495 MYOD1P15172 320 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 EDN2P20800 178 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 FXYD4P59646 89 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 OR2B8PP59922 312 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 POU2AF1Q16633 256 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms