RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 GCSAMLQ5JQS6 135 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 FFAR4Q5NUL3 377 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 ABHD12Q8N2K0 398 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 YPEL4Q96NS1 127 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 NIPSNAP3BQ9BS92 247 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 TMEM147Q9BVK8 224 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 TRGV10A0A0A0MS01 117 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 PMS2P5A8MQ11 134 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 YPEL1O60688 119 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 BCL2P10415 239 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 IRF2P14316 349 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 TNFSF4P23510 183 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 TDGF1P3P51864 188 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 SP5Q6BEB4 398 aaPredicted RBP13□□□□□ -0.33
LRFN1-201ENST00000248668 ABHD5Q8WTS1 349 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 YPEL2Q96QA6 119 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 PSMG3Q9BT73 122 aaPredicted RBP13□□□□□ -0.33
LRFN1-201ENST00000248668 IL19Q9UHD0 177 aa13□□□□□ -0.33
LRFN1-201ENST00000248668 HSPB1P04792 205 aaKnown RBP12.99□□□□□ -0.33
LRFN1-201ENST00000248668 COL8A2P25067 703 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 ERVK-16P61578 105 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 TCF23Q7RTU1 214 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 CCL17Q92583 94 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 NEUROG1Q92886 237 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 TMEM208Q9BTX3 173 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 TMEM140Q9NV12 185 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 C15orf62A8K5M9 175 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 HPRT1P00492 218 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 STUMQ69YW2 141 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 RND1Q92730 232 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 HIST1H2BLQ99880 126 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 LAMP3Q9UQV4 416 aa12.99□□□□□ -0.33
LRFN1-201ENST00000248668 KBTBD11-OT1A0A1B0GTJ5 212 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 THBDP07204 575 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 SERF2P84101 59 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 ADIPOQQ15848 244 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 DPPA3Q6W0C5 159 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 DSCAML1Q8TD84 2053 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 F2RL2O00254 374 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 RRHO14718 337 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 OR10G4Q8NGN3 311 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 OR10G9Q8NGN4 311 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 OR10G7Q8NGN6 311 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 SNHG12Q9BXW3 62 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 CENPEQ02224 2701 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 ANKHD1Q8IWZ3 2542 aaKnown RBP12.98□□□□□ -0.33
LRFN1-201ENST00000248668 MRPS11P82912 194 aaKnown RBP12.98□□□□□ -0.33
LRFN1-201ENST00000248668 ZNF709Q8N972 641 aa12.98□□□□□ -0.33
LRFN1-201ENST00000248668 TGOLN2O43493 480 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 TBR1Q16650 682 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 AARDQ4LEZ3 155 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 MRGPRGQ86SM5 289 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 PINX1Q96BK5 328 aaKnown RBP12.97□□□□□ -0.33
LRFN1-201ENST00000248668 SDSLQ96GA7 329 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 WFIKKN1Q96NZ8 548 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 CIB3Q96Q77 187 aaPredicted RBP12.97□□□□□ -0.33
LRFN1-201ENST00000248668 NDUFAF3Q9BU61 184 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 GATA4P43694 442 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 CCL3L1P16619 93 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 FAM90A2PQ658T7 463 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 MBD3L1Q8WWY6 194 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 TVP23CQ96ET8 276 aa12.97□□□□□ -0.33
LRFN1-201ENST00000248668 TRAV38-1A0A0B4J264 116 aa12.96□□□□□ -0.33
LRFN1-201ENST00000248668 CBY3A6NI87 242 aa12.96□□□□□ -0.33
LRFN1-201ENST00000248668 CGB3P0DN86 165 aa12.96□□□□□ -0.33
LRFN1-201ENST00000248668 CGB7P0DN87 165 aa12.96□□□□□ -0.33
LRFN1-201ENST00000248668 PAX5Q02548 391 aa12.96□□□□□ -0.33
LRFN1-201ENST00000248668 CLEC12BQ2HXU8 276 aa12.96□□□□□ -0.33
LRFN1-201ENST00000248668 CLEC2AQ6UVW9 174 aa12.96□□□□□ -0.33
LRFN1-201ENST00000248668 H1FXQ92522 213 aaKnown RBP12.96□□□□□ -0.33
LRFN1-201ENST00000248668 RPUSD4Q96CM3 377 aaKnown RBP12.96□□□□□ -0.33
LRFN1-201ENST00000248668 SMDT1Q9H4I9 107 aa12.96□□□□□ -0.33
LRFN1-201ENST00000248668 TRAV1-1A0A0B4J248 108 aa12.96□□□□□ -0.34
LRFN1-201ENST00000248668 GZMBP10144 247 aa12.96□□□□□ -0.34
LRFN1-201ENST00000248668 RAB4AP20338 218 aa12.96□□□□□ -0.34
LRFN1-201ENST00000248668 REG1BP48304 166 aa12.96□□□□□ -0.34
LRFN1-201ENST00000248668 PATZ1Q9HBE1 687 aaKnown RBP12.96□□□□□ -0.34
LRFN1-201ENST00000248668 TANC2Q9HCD6 1990 aa12.96□□□□□ -0.34
LRFN1-201ENST00000248668 PLXNB1O43157 2135 aa12.96□□□□□ -0.34
LRFN1-201ENST00000248668 MYO18BQ8IUG5 2567 aa12.96□□□□□ -0.34
LRFN1-201ENST00000248668 RELBQ01201 579 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 TCTEX1D1Q8N7M0 179 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 RAB24Q969Q5 203 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 SAP30LQ9HAJ7 183 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 LBHQ53QV2 105 aaPredicted RBP12.95□□□□□ -0.34
LRFN1-201ENST00000248668 ZNF788Q6ZQV5 615 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 FAM222BQ8WU58 562 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
LRFN1-201ENST00000248668 C17orf100A8MU93 164 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 DLEU1O43261 78 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 IGKV1-16P04430 117 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 PRB3Q04118 309 aaPredicted RBP12.95□□□□□ -0.34
LRFN1-201ENST00000248668 TCF19Q9Y242 345 aa12.95□□□□□ -0.34
LRFN1-201ENST00000248668 CD1BP29016 333 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 CR1LQ2VPA4 569 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 OR4S2Q8NH73 311 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 DCHS2Q6V1P9 2916 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 TRGV8A0A0C4DH27 118 aa12.94□□□□□ -0.34
LRFN1-201ENST00000248668 M0R143 59 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms