RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 TCF23Q7RTU1 214 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 ZNRF1Q8ND25 227 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 ARL6IP6Q8N6S5 226 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 WFDC1Q9HC57 220 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 HIST3H2BBQ8N257 126 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 SRSF12Q8WXF0 261 aaKnown RBP16.8■□□□□ 0.28
SOX4-201ENST00000244745 ZNF703Q9H7S9 590 aaPredicted RBP16.8■□□□□ 0.28
SOX4-201ENST00000244745 NDUFS6O75380 124 aaKnown RBP16.8■□□□□ 0.28
SOX4-201ENST00000244745 SMIM13P0DJ93 91 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 RABAC1Q9UI14 185 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 PEAR1Q5VY43 1037 aaPredicted RBP16.79■□□□□ 0.28
SOX4-201ENST00000244745 LDLRAD4O15165 306 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 CD5P06127 495 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 CCDC144NLQ6NUI1 221 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 MRPL13Q9BYD1 178 aaKnown RBP16.79■□□□□ 0.28
SOX4-201ENST00000244745 C7orf71A4D174 169 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 CGAP01215 116 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 ZNF525Q8N782 197 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 PRR7Q8TB68 274 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 HIST1H2BLQ99880 126 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 MRPL32Q9BYC8 188 aaKnown RBP16.79■□□□□ 0.28
SOX4-201ENST00000244745 TMEM56-RWDD3S4R434 201 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 CLDN16Q9Y5I7 305 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 GBF1Q92538 1859 aa16.79■□□□□ 0.28
SOX4-201ENST00000244745 SERF1AO75920 110 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 CXCL1P09341 107 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 CRIPAKQ8N1N5 446 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 MAP1LC3AQ9H492 121 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 HBBP68871 147 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 JOSD1Q15040 202 aaPredicted RBP16.78■□□□□ 0.28
SOX4-201ENST00000244745 NPIPB3Q92617 1050 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 A1L4Q6 167 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 MOSP00540 346 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 ZNF319Q9P2F9 582 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 GDF9O60383 454 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 FAM19A2Q8N3H0 131 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 IGKV1D-13A0A0B4J2D9 117 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 IGKV1-13P0DP09 117 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 OR51G1Q8NGK1 321 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 LAMTOR2Q9Y2Q5 125 aa16.78■□□□□ 0.28
SOX4-201ENST00000244745 SNAI2O43623 268 aa16.77■□□□□ 0.28
SOX4-201ENST00000244745 SFXN3Q9BWM7 321 aa16.77■□□□□ 0.28
SOX4-201ENST00000244745 CCL21O00585 134 aa16.77■□□□□ 0.28
SOX4-201ENST00000244745 IGFBP2P18065 325 aa16.77■□□□□ 0.28
SOX4-201ENST00000244745 SHISA5Q8N114 240 aa16.77■□□□□ 0.28
SOX4-201ENST00000244745 FOXD3Q9UJU5 478 aaPredicted RBP16.77■□□□□ 0.28
SOX4-201ENST00000244745 CCL20P78556 96 aa16.77■□□□□ 0.28
SOX4-201ENST00000244745 IGKV1D-8A0A087WSZ0 117 aa16.77■□□□□ 0.27
SOX4-201ENST00000244745 LINC00305Q7Z4B0 112 aa16.77■□□□□ 0.27
SOX4-201ENST00000244745 MPZP25189 248 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 C19orf24Q9BVV8 132 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 FOXA3P55318 350 aaPredicted RBP16.76■□□□□ 0.27
SOX4-201ENST00000244745 DGAT2L7PQ6IED9 249 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 OR13A1Q8NGR1 328 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 FTH1P19P0C7X4 201 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 CCL1P22362 96 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 TMEM78Q5T7P6 136 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 CYTL1Q9NRR1 136 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 NUDT3O95989 172 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 OR4C13Q8NGP0 309 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 A0A1B0GV72 72 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 FBLN5Q9UBX5 448 aa16.76■□□□□ 0.27
SOX4-201ENST00000244745 AREGP15514 252 aa16.75■□□□□ 0.27
SOX4-201ENST00000244745 CTSSP25774 331 aa16.75■□□□□ 0.27
SOX4-201ENST00000244745 REPIN1Q9BWE0 567 aaKnown RBP16.75■□□□□ 0.27
SOX4-201ENST00000244745 LIPFP07098 398 aa16.75■□□□□ 0.27
SOX4-201ENST00000244745 PLPPR1Q8TBJ4 325 aa16.75■□□□□ 0.27
SOX4-201ENST00000244745 C16orf92Q96LL3 132 aa16.75■□□□□ 0.27
SOX4-201ENST00000244745 CRXO43186 299 aaPredicted RBP16.75■□□□□ 0.27
SOX4-201ENST00000244745 MST1P26927 711 aa16.75■□□□□ 0.27
SOX4-201ENST00000244745 GPR6P46095 362 aaPredicted RBP16.75■□□□□ 0.27
SOX4-201ENST00000244745 LOXL3P58215 753 aa16.75■□□□□ 0.27
SOX4-201ENST00000244745 DCTN5Q9BTE1 182 aa16.75■□□□□ 0.27
SOX4-201ENST00000244745 ZNF256Q9Y2P7 627 aaPredicted RBP16.75■□□□□ 0.27
SOX4-201ENST00000244745 GOLT1AQ6ZVE7 132 aa16.74■□□□□ 0.27
SOX4-201ENST00000244745 NRN1Q9NPD7 142 aa16.74■□□□□ 0.27
SOX4-201ENST00000244745 C1QL4Q86Z23 238 aa16.74■□□□□ 0.27
SOX4-201ENST00000244745 UNC13CQ8NB66 2214 aa16.74■□□□□ 0.27
SOX4-201ENST00000244745 Q6ZT83 130 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 TET1Q8NFU7 2136 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 IGLV3-19P01714 112 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 CELA3BP08861 270 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 FAM89BQ8N5H3 189 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 TRAV9-1A0A075B6T8 112 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 PSG9Q00887 426 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 TTC32Q5I0X7 151 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 MESP1Q9BRJ9 268 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 J3QW42 95 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 RBFOX2O43251 390 aaKnown RBP eCLIP16.73■□□□□ 0.27
SOX4-201ENST00000244745 FAM201AQ5SY85 155 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 OR4D5Q8NGN0 318 aa16.73■□□□□ 0.27
SOX4-201ENST00000244745 SBF1O95248 1867 aa16.72■□□□□ 0.27
SOX4-201ENST00000244745 ID1P41134 155 aa16.72■□□□□ 0.27
SOX4-201ENST00000244745 FBLN7Q53RD9 439 aa16.72■□□□□ 0.27
SOX4-201ENST00000244745 UMODP07911 640 aa16.72■□□□□ 0.27
SOX4-201ENST00000244745 ANOS1P23352 680 aa16.72■□□□□ 0.27
SOX4-201ENST00000244745 MFAP4P55083 255 aa16.72■□□□□ 0.27
SOX4-201ENST00000244745 NUTF2P61970 127 aaKnown RBP16.72■□□□□ 0.27
SOX4-201ENST00000244745 ZNF324BQ6AW86 544 aaPredicted RBP16.72■□□□□ 0.27
SOX4-201ENST00000244745 TMEM186Q96B77 213 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms