RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 DERL1Q9BUN8 251 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 PILRAQ9UKJ1 303 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 STRCP1A6NGW2 1772 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 A0A1B0GWB2 263 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 EREGO14944 169 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 SCGB1A1P11684 91 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 GCHFRP30047 84 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 ADIPOQQ15848 244 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 DRAM1Q8N682 238 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 MS4A5Q9H3V2 200 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 RBBP6Q7Z6E9 1792 aaKnown RBP6.41□□□□□ -1.38
RIF1-201ENST00000243326 IFNL4K9M1U5 179 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 AMMECR1LQ6DCA0 310 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 UNQ5815/PRO19632Q6UWF5 114 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 C16orf92Q96LL3 132 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 DXOO77932 396 aaKnown RBP6.41□□□□□ -1.38
RIF1-201ENST00000243326 SRD5A2P31213 254 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 EGR4Q05215 589 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 ANKRD36A6QL64 1941 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 TRAV5A0A0B4J249 113 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 IGFBP2P18065 325 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 LBHQ53QV2 105 aaPredicted RBP6.41□□□□□ -1.38
RIF1-201ENST00000243326 TIAF1O95411 115 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 ZNF735P0CB33 412 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 SCAND1P57086 179 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 KCNMB1Q16558 191 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 GP6Q9HCN6 339 aa6.41□□□□□ -1.38
RIF1-201ENST00000243326 SPAARA0A1B0GVQ0 90 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 IL6RP08887 468 aaPredicted RBP6.4□□□□□ -1.38
RIF1-201ENST00000243326 CELA3AP09093 270 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 CD24P25063 80 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 RPS11P62280 158 aaKnown RBP eCLIP6.4□□□□□ -1.38
RIF1-201ENST00000243326 RNPS1Q15287 305 aaKnown RBP6.4□□□□□ -1.38
RIF1-201ENST00000243326 NIT1Q86X76 327 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 SLC25A10Q9UBX3 287 aaPredicted RBP6.4□□□□□ -1.38
RIF1-201ENST00000243326 ANOS1P23352 680 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 ZNF256Q9Y2P7 627 aaPredicted RBP6.4□□□□□ -1.38
RIF1-201ENST00000243326 OR51G1Q8NGK1 321 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 MRPL16Q9NX20 251 aaKnown RBP6.4□□□□□ -1.38
RIF1-201ENST00000243326 IGKV1D-8A0A087WSZ0 117 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 HYPMO75409 117 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 CEACAM1P13688 526 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 UCP2P55851 309 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 DLX6P56179 175 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 SLC25A47Q6Q0C1 308 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 OR2V2Q96R30 315 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 PRNDQ9UKY0 176 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 FHL5Q5TD97 284 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 REG4Q9BYZ8 158 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 TANC2Q9HCD6 1990 aa6.4□□□□□ -1.38
RIF1-201ENST00000243326 H0Y980 276 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 NRN1Q9NPD7 142 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 CALYQ9NYX4 217 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 RAMP3O60896 148 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 TMEM45BQ96B21 275 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 MARS2Q96GW9 593 aaKnown RBP6.4□□□□□ -1.39
RIF1-201ENST00000243326 SPOCK3Q9BQ16 436 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 RAC3P60763 192 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 ZNF658BQ4V348 819 aaPredicted RBP6.4□□□□□ -1.39
RIF1-201ENST00000243326 HIST1H2BLQ99880 126 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 TMEM256Q8N2U0 113 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 ZNF645Q8N7E2 425 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 LINC00470Q9BZP3 86 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 RPL23P62829 140 aaKnown RBP6.4□□□□□ -1.39
RIF1-201ENST00000243326 SMAGPQ0VAQ4 97 aa6.4□□□□□ -1.39
RIF1-201ENST00000243326 Q96M66 194 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 TCFL5Q9UL49 500 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 NPIPB8E9PQR5 432 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 NPIPB7O75200 414 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 KIR2DS2P43631 304 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 NPVFQ9HCQ7 196 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 CARHSP1Q9Y2V2 147 aaKnown RBP6.39□□□□□ -1.39
RIF1-201ENST00000243326 APOHP02749 345 aaPredicted RBP6.39□□□□□ -1.39
RIF1-201ENST00000243326 OR5R1Q8NH85 324 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 ANK1P16157 1881 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 AMMECR1Q9Y4X0 333 aaPredicted RBP6.39□□□□□ -1.39
RIF1-201ENST00000243326 ZNF729A6NN14 1252 aaPredicted RBP6.39□□□□□ -1.39
RIF1-201ENST00000243326 F2RL2O00254 374 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 FOXH1O75593 365 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 LINC00614P0C842 121 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 SRFP11831 508 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 FSTP19883 344 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 TTTY12Q9BZ98 90 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 A1L4Q6 167 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 SH2D7A6NKC9 451 aaPredicted RBP6.39□□□□□ -1.39
RIF1-201ENST00000243326 NXPH1P58417 271 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 LURAP1LQ8IV03 231 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 NABP2Q9BQ15 211 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 CLDN16Q9Y5I7 305 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 A0A1W2PQF6 199 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 CX3CL1P78423 397 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 CLDND2Q8NHS1 167 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 WDYHV1Q96HA8 205 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 JKAMPQ9P055 326 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 CELA3BP08861 270 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 SDF2L1Q9HCN8 221 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 SAMD13Q5VXD3 122 aa6.39□□□□□ -1.39
RIF1-201ENST00000243326 PSMB11A5LHX3 300 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms