RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 ZNF236Q9UL36 1845 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 H7C1H1 209 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 RRHO14718 337 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 LDLRAD2Q5SZI1 272 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 C1orf162Q8NEQ5 155 aaPredicted RBP9.4□□□□□ -0.9
KNOP1-201ENST00000219837 NUDT10Q8NFP7 164 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 NUDT11Q96G61 164 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 ZNF815PA8K554 130 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 C1QL1O75973 258 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 WISP3O95389 354 aaPredicted RBP9.4□□□□□ -0.9
KNOP1-201ENST00000219837 PLP1P60201 277 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 MEF2BQ02080 365 aaPredicted RBP9.4□□□□□ -0.9
KNOP1-201ENST00000219837 LY6DQ14210 128 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 C5orf66Q9H5L9 145 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 COL4A1P02462 1669 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 LINC00862A6NCI5 91 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 SMIM6P0DI80 62 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 SMIM10L1P0DMW3 83 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 ATOH7Q8N100 152 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 SMIM10Q96HG1 83 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 DMRTA2Q96SC8 542 aa9.4□□□□□ -0.9
KNOP1-201ENST00000219837 C19orf24Q9BVV8 132 aa9.4□□□□□ -0.91
KNOP1-201ENST00000219837 MRPL20Q9BYC9 149 aaKnown RBP9.4□□□□□ -0.91
KNOP1-201ENST00000219837 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.91
KNOP1-201ENST00000219837 CHCHD2Q9Y6H1 151 aaPredicted RBP9.4□□□□□ -0.91
KNOP1-201ENST00000219837 LRRC37AA6NMS7 1700 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 IGHV3OR16-8A0A075B7F1 116 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 CELA3BP08861 270 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 CENPWQ5EE01 88 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 KIAA1644Q3SXP7 199 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 TFF3Q07654 80 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 FAM216BQ8N7L0 139 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 FMC1Q96HJ9 113 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 NDUFA3O95167 84 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 EFEMP2O95967 443 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 WFIKKN1Q96NZ8 548 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 TRAV24A0A0B4J272 114 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 A0A1W2PR77 199 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 H3BRM9 83 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 HLA-DQB1P01920 261 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 AGAP20933 346 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 VGLL1Q99990 258 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 CBLN4Q9NTU7 201 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 DPM3Q9P2X0 92 aa9.39□□□□□ -0.91
KNOP1-201ENST00000219837 PEX7O00628 323 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 EIF4EBP2Q13542 120 aaPredicted RBP9.38□□□□□ -0.91
KNOP1-201ENST00000219837 PMCHL1Q16048 86 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 C18orf15Q96N68 181 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 ZNF250P15622 560 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 PAX1P15863 534 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 IGFBP2P18065 325 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 HBBP68871 147 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 JMJD8Q96S16 334 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 SMDT1Q9H4I9 107 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 RBMY1BA6NDE4 496 aaKnown RBP9.38□□□□□ -0.91
KNOP1-201ENST00000219837 RBMY1EA6NEQ0 496 aaKnown RBP9.38□□□□□ -0.91
KNOP1-201ENST00000219837 RBMY1DP0C7P1 496 aaKnown RBP9.38□□□□□ -0.91
KNOP1-201ENST00000219837 RBMY1A1P0DJD3 496 aaKnown RBP9.38□□□□□ -0.91
KNOP1-201ENST00000219837 RBMY1CP0DJD4 496 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 TTC32Q5I0X7 151 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 SAPCD1Q5SSQ6 148 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 ZIC4Q8N9L1 334 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 FAM71F2Q6NXP2 309 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 TMEM105Q8N8V8 129 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 WDYHV1Q96HA8 205 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 ALX4Q9H161 411 aaPredicted RBP9.38□□□□□ -0.91
KNOP1-201ENST00000219837 GLRXP35754 106 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 TXNDC17Q9BRA2 123 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 WNT10AQ9GZT5 417 aa9.38□□□□□ -0.91
KNOP1-201ENST00000219837 TBL2Q9Y4P3 447 aaKnown RBP9.38□□□□□ -0.91
KNOP1-201ENST00000219837 SMIM13P0DJ93 91 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 TMEM42Q69YG0 159 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 SCGB3A1Q96QR1 104 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 SPSB2Q99619 263 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 PMCHL2Q9BQD1 86 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 IFI27L2Q9H2X8 130 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 ARID2Q68CP9 1835 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 GREM1O60565 184 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 ZNF688P0C7X2 276 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 NRN1LQ496H8 165 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 RIPPLY2Q5TAB7 128 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 C9orf106Q8NAJ2 232 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 FAM131CQ96AQ9 280 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 METRNQ9UJH8 293 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 GRIFINA4D1Z8 144 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 RNASE6Q93091 150 aaKnown RBP9.37□□□□□ -0.91
KNOP1-201ENST00000219837 C1orf100Q5SVJ3 147 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
KNOP1-201ENST00000219837 GP6Q9HCN6 339 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 CGAP01215 116 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 THBDP07204 575 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 POC1AQ8NBT0 407 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 TMEM167AQ8TBQ9 72 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 WFDC12Q8WWY7 111 aa9.37□□□□□ -0.91
KNOP1-201ENST00000219837 TRPM6Q9BX84 2022 aa9.36□□□□□ -0.91
KNOP1-201ENST00000219837 TRBV9A0A0B4J1U6 114 aa9.36□□□□□ -0.91
KNOP1-201ENST00000219837 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms