RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 IGLV1-44P01699 117 aa18.26■□□□□ 0.51
HTATSF1-201ENST00000218364 RPL29P47914 159 aaKnown RBP18.26■□□□□ 0.51
HTATSF1-201ENST00000218364 THBS3P49746 956 aa18.26■□□□□ 0.51
HTATSF1-201ENST00000218364 LINC00310P59036 64 aa18.26■□□□□ 0.51
HTATSF1-201ENST00000218364 C15orf61A6NNL5 157 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 MT-CO2P00403 227 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 AREGP15514 252 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 HNF1AP20823 631 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 KIR2DL2P43627 348 aaPredicted RBP18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 HLA-DRB5Q30154 266 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 ATP1A1-AS1Q5TC04 95 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 STPG3Q8N7X2 389 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 LNP1A1A4G5 178 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 GRIFINA4D1Z8 144 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 RAB4AP20338 218 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 SPATA31B1PQ5VZV4 182 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 TMPRSS7Q7RTY8 843 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 PPP1R35Q8TAP8 253 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 DUSP13Q9UII6 198 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 CD59P13987 128 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 CBLN1P23435 193 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 LGALS4P56470 323 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 TPPP2P59282 170 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 CNEP1R1Q8N9A8 125 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 UHRF2Q96PU4 802 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 TBX15Q96SF7 602 aa18.25■□□□□ 0.51
HTATSF1-201ENST00000218364 AHCTF1Q8WYP5 2266 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 ITGB1BP1O14713 200 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 TNFSF10P50591 281 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 OR4S2Q8NH73 311 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 MRPL18Q9H0U6 180 aaKnown RBP18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 CFHR2P36980 270 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 PRR20EP86478 221 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 PRR20CP86479 221 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 PRR20DP86480 221 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 PRR20BP86481 221 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 PRR20AP86496 221 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 C1orf229Q6ZS94 237 aaPredicted RBP18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 Q6ZWC4 215 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 C1orf174Q8IYL3 243 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 EAF1Q96JC9 268 aaPredicted RBP18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 FOXA2Q9Y261 457 aaPredicted RBP18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 ARL2-SNX15V9GYD0 113 aa18.24■□□□□ 0.51
HTATSF1-201ENST00000218364 IGHV2OR16-5A0A0B4J2B6 119 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 NPY1RP25929 384 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 VWA1Q6PCB0 445 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 SLC24A4Q8NFF2 622 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 ZNF705FA8MVS1 300 aaPredicted RBP18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 A8MXE2 369 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 FNDC10F2Z333 226 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 SLC17A3O00476 420 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 ZNF705DP0CH99 300 aaPredicted RBP18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 ZNF705BP0CI00 300 aaPredicted RBP18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 CRISP2P16562 243 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 RAB31Q13636 194 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 TMEM14BQ9NUH8 114 aa18.23■□□□□ 0.51
HTATSF1-201ENST00000218364 FOXH1O75593 365 aa18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 HSPE1P61604 102 aaKnown RBP18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 MRPL52Q86TS9 123 aaKnown RBP18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 CACNA1DQ01668 2161 aa18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 CGB3P0DN86 165 aa18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 CGB7P0DN87 165 aa18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 RANP62826 216 aaKnown RBP18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 Q0VG73 95 aa18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 TEX43Q6ZNM6 134 aa18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 SLC25A10Q9UBX3 287 aaPredicted RBP18.22■□□□□ 0.51
HTATSF1-201ENST00000218364 IGHV1-18A0A0C4DH31 117 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 RAB7AP51149 207 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 TDGF1P3P51864 188 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 OR2Z1Q8NG97 314 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 OR1L6Q8NGR2 347 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 C20orf144Q9BQM9 153 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 ATG101Q9BSB4 218 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 SFXN3Q9BWM7 321 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 TRBV9A0A0B4J1U6 114 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 KRTCAP3Q53RY4 240 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 TPTE2P1Q5T6R2 138 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 C9orf106Q8NAJ2 232 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 NEUROG1Q92886 237 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 CALYQ9NYX4 217 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 V9GYV3 84 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 ZNF318Q5VUA4 2279 aa18.21■□□□□ 0.51
HTATSF1-201ENST00000218364 SERF1AO75920 110 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 RPEL1Q2QD12 228 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 OR4A47Q6IF82 309 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 GCSAMQ8N6F7 178 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 OR4P4Q8NGL7 312 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 NCOR1P1Q9H4R4 102 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 CA2P00918 260 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 IGHV3-13P01766 116 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 IGHV3-7P01780 117 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 LINC00869P0C866 280 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 PLA2G2CQ5R387 149 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 MMD2Q8IY49 270 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 CORO2AQ92828 525 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 HCFC1P51610 2035 aa18.2■□□□□ 0.5
HTATSF1-201ENST00000218364 OR10J4P0C629 311 aa18.19■□□□□ 0.5
HTATSF1-201ENST00000218364 LRFN3Q9BTN0 628 aa18.19■□□□□ 0.5
HTATSF1-201ENST00000218364 FAM186AA6NE01 2351 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms