RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ATP6V0BQ99437 205 aa12.31□□□□□ -0.44
PTPRA-201ENST00000216877 HEYLQ9NQ87 328 aaPredicted RBP12.31□□□□□ -0.44
PTPRA-201ENST00000216877 YTHDF2Q9Y5A9 579 aaKnown RBP12.31□□□□□ -0.44
PTPRA-201ENST00000216877 R4GN57 208 aa12.31□□□□□ -0.44
PTPRA-201ENST00000216877 LEPROTL1O95214 131 aa12.31□□□□□ -0.44
PTPRA-201ENST00000216877 CRYBA4P53673 196 aa12.31□□□□□ -0.44
PTPRA-201ENST00000216877 ST8SIA1Q92185 356 aa12.31□□□□□ -0.44
PTPRA-201ENST00000216877 MRPL27Q9P0M9 148 aaKnown RBP12.31□□□□□ -0.44
PTPRA-201ENST00000216877 DOCK7Q96N67 2140 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 C5orf49A4QMS7 147 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 DHHO43323 396 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 TMEM45BQ96B21 275 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 UBE2ZQ9H832 354 aaPredicted RBP12.3□□□□□ -0.44
PTPRA-201ENST00000216877 TIMM9Q9Y5J7 89 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 PCDH15Q96QU1 1955 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 EFNA2O43921 213 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 OR10G3Q8NGC4 313 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 OR1L3Q8NH93 324 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 OXGR1Q96P68 337 aa12.3□□□□□ -0.44
PTPRA-201ENST00000216877 LIN7CQ9NUP9 197 aaKnown RBP12.3□□□□□ -0.44
PTPRA-201ENST00000216877 TRBV9A0A0B4J1U6 114 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 ZNF137PP52743 207 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 IBA57Q5T440 356 aaKnown RBP12.29□□□□□ -0.44
PTPRA-201ENST00000216877 H2BFWTQ7Z2G1 175 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 TSSC4Q9Y5U2 329 aaPredicted RBP12.29□□□□□ -0.44
PTPRA-201ENST00000216877 TRIOO75962 3097 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 CD1BP29016 333 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 LTC4SQ16873 150 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 ZNF355PQ9NSJ1 428 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 CGAP01215 116 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 CCL2P13500 99 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 IGLV3-21P80748 117 aaPredicted RBP12.29□□□□□ -0.44
PTPRA-201ENST00000216877 PSG5Q15238 335 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 DHRS13Q6UX07 377 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 JKAMPQ9P055 326 aa12.29□□□□□ -0.44
PTPRA-201ENST00000216877 SPATA31B1PQ5VZV4 182 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 SCCPDHQ8NBX0 429 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 LOC102723996A0A087X1L8 192 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 GABRG2P18507 467 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 CX3CL1P78423 397 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 CEACAM21Q3KPI0 293 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 SGK494Q96LW2 274 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 UCN2Q96RP3 112 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 TRIB1Q96RU8 372 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.28□□□□□ -0.44
PTPRA-201ENST00000216877 TMEM38BQ9NVV0 291 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 TEX48A0A1B0GUV7 120 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 RRHO14718 337 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 RAMP3O60896 148 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 CXorf1O96002 111 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 ZNF138P52744 262 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 RHOBP62745 196 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 C20orf204Q6ZNR8 217 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 SPATA12Q7Z6I5 190 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 ST20Q9HBF5 79 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 ABCA1O95477 2261 aa12.28□□□□□ -0.44
PTPRA-201ENST00000216877 A0A1W2PQD3 144 aa12.27□□□□□ -0.44
PTPRA-201ENST00000216877 H0YJW9 148 aa12.27□□□□□ -0.44
PTPRA-201ENST00000216877 FOXH1O75593 365 aa12.27□□□□□ -0.44
PTPRA-201ENST00000216877 ADH4P08319 380 aa12.27□□□□□ -0.44
PTPRA-201ENST00000216877 MC5RP33032 325 aa12.27□□□□□ -0.44
PTPRA-201ENST00000216877 RPS20P60866 119 aaKnown RBP12.27□□□□□ -0.44
PTPRA-201ENST00000216877 CFAP161Q6P656 301 aa12.27□□□□□ -0.44
PTPRA-201ENST00000216877 GUCD1Q96NT3 240 aa12.27□□□□□ -0.44
PTPRA-201ENST00000216877 REPIN1Q9BWE0 567 aaKnown RBP12.27□□□□□ -0.44
PTPRA-201ENST00000216877 LSM4Q9Y4Z0 139 aaKnown RBP12.27□□□□□ -0.44
PTPRA-201ENST00000216877 IFI6P09912 130 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 ZNF32P17041 273 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 SRD5A2P31213 254 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 RSPO1Q2MKA7 263 aaPredicted RBP12.27□□□□□ -0.45
PTPRA-201ENST00000216877 VWC2Q2TAL6 325 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 TMEM14EPQ6UXP3 125 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 SAP30LQ9HAJ7 183 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 F11RQ9Y624 299 aaKnown RBP12.27□□□□□ -0.45
PTPRA-201ENST00000216877 V9GYV3 84 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 SPAARA0A1B0GVQ0 90 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 TNFRSF4P43489 277 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 CXCL12P48061 93 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 TMEM97Q5BJF2 176 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 SLC25A40Q8TBP6 338 aa12.27□□□□□ -0.45
PTPRA-201ENST00000216877 A0A0G2JLM5 398 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 IGKV3-11P04433 115 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 MRPS21P82921 87 aaKnown RBP12.26□□□□□ -0.45
PTPRA-201ENST00000216877 SPTAN1Q13813 2472 aaKnown RBP12.26□□□□□ -0.45
PTPRA-201ENST00000216877 PLCE1Q9P212 2302 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 A6NDN8 102 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 AHRRA9YTQ3 701 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 GCHFRP30047 84 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 LINC00205P59089 165 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 HSD52Q0P140 79 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 MTURNQ8N3F0 131 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 DEFB123Q8N688 67 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 OR2M7Q8NG81 312 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 LSM10Q969L4 123 aaKnown RBP12.26□□□□□ -0.45
PTPRA-201ENST00000216877 FSCN3Q9NQT6 498 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 TNFRSF19Q9NS68 423 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 PIGBOS1A0A0B4J2F0 54 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 IGHV5-51A0A0C4DH38 117 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 IGFBP7Q16270 282 aa12.26□□□□□ -0.45
PTPRA-201ENST00000216877 DNAJC13O75165 2243 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms