RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 LRTM2Q8N967 370 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 RBBP6Q7Z6E9 1792 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 MARCH11A6NNE9 402 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 TMEM196Q5HYL7 178 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 HOGA1Q86XE5 327 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 G6PC2Q9NQR9 355 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 ST6GALNAC2Q9UJ37 374 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 ELF5Q9UKW6 265 aaPredicted RBP12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 TNFRSF9Q07011 255 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 FGFRL1Q8N441 504 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 GPR146Q96CH1 333 aa12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 MRPS18BQ9Y676 258 aaKnown RBP12.57□□□□□ -0.4
SPTLC2-201ENST00000216484 SMAD7O15105 426 aaKnown RBP12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 RTN4RL2Q86UN3 420 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 CRYGNQ8WXF5 182 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 MGST2Q99735 147 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 A0A0U1RRA0 63 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 DCAF10Q5QP82 559 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 PCSK4Q6UW60 755 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 OPN3Q9H1Y3 402 aaPredicted RBP12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 KIAA1549Q9HCM3 1950 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 GFI1BQ5VTD9 330 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 HBDP02042 147 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 JPT2Q9H910 190 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 M0R2P5 195 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 SPINT1O43278 529 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 CD8AP01732 235 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 PGFP49763 221 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 A0A1B0GUT8 65 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 OR2H2O95918 312 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 IFI27P40305 119 aaPredicted RBP12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 JMJD8Q96S16 334 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 NABP2Q9BQ15 211 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 MOSP00540 346 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 RSPO2Q6UXX9 243 aaPredicted RBP12.56□□□□□ -0.4
SPTLC2-201ENST00000216484 MAJINQ3KP22 176 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 GPBAR1Q8TDU6 330 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 BGLAPP02818 100 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 TRGV3P03979 118 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 HOXD4P09016 255 aaPredicted RBP12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 UCP2P55851 309 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 C1QL3Q5VWW1 255 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 PLCH1Q4KWH8 1693 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 GZMBP10144 247 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 MPV17P39210 176 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 FGF12P61328 243 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 CEACAM21Q3KPI0 293 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 FAM219BQ5XKK7 198 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 TNFRSF14Q92956 283 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 C5orf30Q96GV9 206 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 TMEM222Q9H0R3 208 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 PKD1L3Q7Z443 1732 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 KCNE1BA0A087WTH5 132 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 TLNRD1Q9H1K6 362 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 TNFRSF6BO95407 300 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 GPR183P32249 361 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 PKIBQ9C010 78 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 TOMM40O96008 361 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 IGLV3-27P01718 113 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 TBR1Q16650 682 aa12.55□□□□□ -0.4
SPTLC2-201ENST00000216484 LOC105371242A0A075B767 164 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 OCIAD2Q56VL3 154 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 ORMDL3Q8N138 153 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 MRPL32Q9BYC8 188 aaKnown RBP12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 TMEM240Q5SV17 173 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 VSIG8P0DPA2 414 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 LINC00158P58513 81 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 C1orf122Q6ZSJ8 110 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 C19orf24Q9BVV8 132 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 IGHV1OR21-1A0A087WYE8 117 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 TRBV5-4A0A0C4DH59 114 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 ATP5J2P56134 94 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 DCAF12L2Q5VW00 463 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 STHQ8IWL8 128 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 A8MWV9 139 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 ATXN8Q156A1 80 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 CCL3P10147 92 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 YAE1D1Q9NRH1 226 aa12.54□□□□□ -0.4
SPTLC2-201ENST00000216484 HOXB3P14651 431 aaPredicted RBP12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 RND3P61587 244 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 C1orf174Q8IYL3 243 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 ZNF257Q9Y2Q1 563 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 LDLRAD2Q5SZI1 272 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 INS-IGF2F8WCM5 200 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 INSP01308 110 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 CD7P09564 240 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 TGIF1Q15583 401 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 TIMM23BQ5SRD1 257 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 RALGAPA2Q2PPJ7 1873 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 PPIAL4CA0A0B4J2A2 164 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 CELA2BP08218 269 aaPredicted RBP12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 PPIAL4GP0DN37 164 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 ABHD12Q8N2K0 398 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 GCSAMQ8N6F7 178 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 TMEM252Q8N6L7 170 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 GLMPQ8WWB7 406 aa12.53□□□□□ -0.4
SPTLC2-201ENST00000216484 S4R3C0 116 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms