RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 KRASP01116 189 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 IGKV1-5P01602 117 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 HOXB5P09067 269 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 FAM106CPP0CH98 169 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 NQO2P16083 231 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM11P17152 192 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 G6PCP35575 357 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 ERVK-16P61578 105 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 RPS16P62249 146 aaKnown RBP7.49□□□□□ -1.21
PHGDH-228ENST00000641847 HNF4GQ14541 408 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 AANATQ16613 207 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 KPRPQ5T749 579 aaPredicted RBP7.49□□□□□ -1.21
PHGDH-228ENST00000641847 LYZL2Q7Z4W2 148 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM86BQ8N661 226 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 OR2T10Q8NGZ9 312 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 EAF1Q96JC9 268 aaPredicted RBP7.49□□□□□ -1.21
PHGDH-228ENST00000641847 RITA1Q96K30 269 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 SSX3Q99909 188 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 TNFRSF19Q9NS68 423 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM140Q9NV12 185 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 C1RLQ9NZP8 487 aa7.49□□□□□ -1.21
PHGDH-228ENST00000641847 PIGBOS1A0A0B4J2F0 54 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 DUXBA0A1W2PPF3 345 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 BTBD17A6NE02 478 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 DBX1A6NMT0 343 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 ADAP1O75689 374 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 SPDEFO95238 335 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 HRASP01112 189 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 PRB2P02812 416 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-228ENST00000641847 SAA1P0DJI8 122 aaPredicted RBP7.48□□□□□ -1.21
PHGDH-228ENST00000641847 CNTFRP26992 372 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 EBI3Q14213 229 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 MMDQ15546 238 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 LY6EQ16553 131 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 POU2AF1Q16633 256 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 SSX9Q7RTT3 188 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 THNSL2Q86YJ6 484 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 VKORC1L1Q8N0U8 176 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 Q8N6K4 173 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 DMBX1Q8NFW5 382 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 PIFOQ8TCI5 191 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 RRNAD1Q96FB5 475 aaKnown RBP7.48□□□□□ -1.21
PHGDH-228ENST00000641847 SEC22AQ96IW7 307 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 TSNAXQ99598 290 aaKnown RBP7.48□□□□□ -1.21
PHGDH-228ENST00000641847 RNF5Q99942 180 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 MED28Q9H204 178 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 RAB18Q9NP72 206 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 MGAT4CQ9UBM8 478 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 TCF19Q9Y242 345 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 TMED3Q9Y3Q3 217 aa7.48□□□□□ -1.21
PHGDH-228ENST00000641847 A0A0G2JRQ6 117 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 A6NDX4 124 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 SRRM4A7MD48 611 aaKnown RBP7.47□□□□□ -1.21
PHGDH-228ENST00000641847 FAM25EA8MYX2 175 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 NBR2O15453 112 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 SLC25A17O43808 307 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 IFNA21P01568 189 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 IGLV2-23P01705 113 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 IGHV4-59P01825 116 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 LGALS7P47929 136 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 UBE2KP61086 200 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 RRAS2P62070 204 aaPredicted RBP7.47□□□□□ -1.21
PHGDH-228ENST00000641847 PSG5Q15238 335 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 FCN2Q15485 313 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 VMA21Q3ZAQ7 101 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 NMSQ5H8A3 153 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 GGNBP1Q5YKI7 109 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 OR4A47Q6IF82 309 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 Q6YL49 198 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 TMEM219Q86XT9 240 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 OR5M8Q8NGP6 311 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 OR5R1Q8NH85 324 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 LSM10Q969L4 123 aaKnown RBP7.47□□□□□ -1.21
PHGDH-228ENST00000641847 RHOVQ96L33 236 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 AIFM2Q9BRQ8 373 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 PRDM13Q9H4Q3 707 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 KIAA1456Q9P272 454 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 METTL1Q9UBP6 276 aaKnown RBP7.47□□□□□ -1.21
PHGDH-228ENST00000641847 POMT1Q9Y6A1 747 aa7.47□□□□□ -1.21
PHGDH-228ENST00000641847 DNAH3Q8TD57 4116 aa7.46□□□□□ -1.21
PHGDH-228ENST00000641847 MPTX1A8MV57 137 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 KBTBD11O94819 623 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 OR2F2O95006 317 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 NDUFA3O95167 84 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 OPN1MWP04001 364 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 OR9G9P0C7N8 305 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 P0C879 139 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 SULT1A3P0DMM9 295 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 SULT1A4P0DMN0 295 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 OPN1MW2P0DN77 364 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 OPN1MW3P0DN78 364 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 VDAC1P21796 283 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 IER3P46695 156 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 F2RL1P55085 397 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 OR2B8PP59922 312 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 RELBQ01201 579 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 PLGLAQ15195 96 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 IZUMO4Q1ZYL8 232 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 SAMD5Q5TGI4 173 aa7.46□□□□□ -1.22
PHGDH-228ENST00000641847 THOC7Q6I9Y2 204 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms