RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CLEC5AQ9NY25 188 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 RALYQ9UKM9 306 aaKnown RBP14.83□□□□□ -0.04
SCARB2-223ENST00000640640 C5orf63A6NC05 138 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 SMIM6P0DI80 62 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 FCER1GP30273 86 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 KLRB1Q12918 225 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 SCNM1Q9BWG6 230 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 TMEM56-RWDD3S4R434 201 aa14.83□□□□□ -0.04
SCARB2-223ENST00000640640 TRAV24A0A0B4J272 114 aa14.82□□□□□ -0.04
SCARB2-223ENST00000640640 CSN3P07498 182 aa14.82□□□□□ -0.04
SCARB2-223ENST00000640640 C5orf17Q8NAS9 161 aa14.82□□□□□ -0.04
SCARB2-223ENST00000640640 RCC1LQ96I51 464 aaKnown RBP14.82□□□□□ -0.04
SCARB2-223ENST00000640640 MIOXQ9UGB7 285 aa14.82□□□□□ -0.04
SCARB2-223ENST00000640640 YTHDF2Q9Y5A9 579 aaKnown RBP14.82□□□□□ -0.04
SCARB2-223ENST00000640640 FAM3BP58499 235 aaPredicted RBP14.82□□□□□ -0.04
SCARB2-223ENST00000640640 BSPH1Q075Z2 132 aa14.82□□□□□ -0.04
SCARB2-223ENST00000640640 A8MXK9 166 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 PTBP3O95758 552 aaKnown RBP14.81□□□□□ -0.04
SCARB2-223ENST00000640640 HIST1H1BP16401 226 aaKnown RBP14.81□□□□□ -0.04
SCARB2-223ENST00000640640 NAGKQ9UJ70 344 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 OR2J3O76001 311 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 CLEC7AQ9BXN2 247 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 IGKV3-7A0A075B6H7 116 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 ZNF146Q15072 292 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 OR5R1Q8NH85 324 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 TRGC2P03986 189 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 OR2D3Q8NGH3 330 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 KCNMB2Q9Y691 235 aa14.81□□□□□ -0.04
SCARB2-223ENST00000640640 LIPFP07098 398 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 ARL14EPLP0DKL9 152 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 CCKARP32238 428 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 C1QTNF12Q5T7M4 302 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 DNAJC4Q9NNZ3 241 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 PLXNA2O75051 1894 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 KBTBD11-OT1A0A1B0GTJ5 212 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 MFAP2P55001 183 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 CLEC2AQ6UVW9 174 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 WDR82Q6UXN9 313 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 IGKV1-27A0A075B6S5 117 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 C8orf88P0DMB2 117 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 HIST3H3Q16695 136 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 LHFPL1Q86WI0 220 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 DNASE2O00115 360 aaPredicted RBP14.8□□□□□ -0.04
SCARB2-223ENST00000640640 IGHV3-48P01763 117 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 TMEM183BQ1AE95 376 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 RNF144BQ7Z419 303 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 FAM90A1Q86YD7 464 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 OR4A5Q8NH83 315 aa14.8□□□□□ -0.04
SCARB2-223ENST00000640640 E9PQ18 207 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 ORM1P02763 201 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 HNRNPA3P51991 378 aaKnown RBP14.79□□□□□ -0.04
SCARB2-223ENST00000640640 FAM106CPP0CH98 169 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 COMPP49747 757 aaPredicted RBP14.79□□□□□ -0.04
SCARB2-223ENST00000640640 SLC35B1P78383 322 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 NABP2Q9BQ15 211 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 ZNF98A6NK75 572 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 C17orf100A8MU93 164 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 TM4SF5O14894 197 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 FOXF2Q12947 444 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 PARLQ9H300 379 aa14.79□□□□□ -0.04
SCARB2-223ENST00000640640 REG1AP05451 166 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 OTX1P32242 354 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-223ENST00000640640 RPL29P47914 159 aaKnown RBP14.78□□□□□ -0.04
SCARB2-223ENST00000640640 PNKDQ8N490 385 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 OSR1Q8TAX0 266 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-223ENST00000640640 NPIPB3Q92617 1050 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 NOTCH3Q9UM47 2321 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 PGPA6NDG6 321 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 B3GALT5-AS1P59052 145 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 RIGQ13278 110 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 ZNF497Q6ZNH5 498 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 C11orf42Q8N5U0 333 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 DPF1Q92782 380 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 CA2P00918 260 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 ATP5IP56385 69 aaPredicted RBP14.78□□□□□ -0.04
SCARB2-223ENST00000640640 LRRC75BQ2VPJ9 315 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 SRP14P37108 136 aaKnown RBP14.78□□□□□ -0.04
SCARB2-223ENST00000640640 C18orf12Q96KH6 178 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 PLXND1Q9Y4D7 1925 aa14.78□□□□□ -0.04
SCARB2-223ENST00000640640 TMEM250H0YL14 139 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 DNM1P46Q6ZS02 220 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 LRP11Q86VZ4 500 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 NHLRC2Q8NBF2 726 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 ATXN7O15265 892 aaPredicted RBP14.77□□□□□ -0.04
SCARB2-223ENST00000640640 IL18BPO95998 194 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 OR5AL1P0C617 328 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 BIVMQ86UB2 503 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 BPIFA4PQ86YQ2 179 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 STPG3Q8N7X2 389 aa14.77□□□□□ -0.04
SCARB2-223ENST00000640640 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.77□□□□□ -0.04
SCARB2-223ENST00000640640 LOC105371242A0A075B767 164 aa14.77□□□□□ -0.05
SCARB2-223ENST00000640640 M0R2Z0 102 aa14.77□□□□□ -0.05
SCARB2-223ENST00000640640 ISLRO14498 428 aa14.77□□□□□ -0.05
SCARB2-223ENST00000640640 NHLH1Q02575 133 aa14.77□□□□□ -0.05
SCARB2-223ENST00000640640 IBA57Q5T440 356 aaKnown RBP14.77□□□□□ -0.05
SCARB2-223ENST00000640640 NPCDR1Q9BY65 106 aa14.77□□□□□ -0.05
SCARB2-223ENST00000640640 TMSB15BA0A087X1C1 80 aa14.77□□□□□ -0.05
SCARB2-223ENST00000640640 CXorf65A6NEN9 183 aa14.77□□□□□ -0.05
SCARB2-223ENST00000640640 SNRNP40Q96DI7 357 aaKnown RBP14.77□□□□□ -0.05
SCARB2-223ENST00000640640 ZNF506Q5JVG8 444 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms