RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 IGHV2OR16-5A0A0B4J2B6 119 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 LGALS7P47929 136 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 TIMM23BQ5SRD1 257 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 LINC00518Q8N0U6 118 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 NHLRC2Q8NBF2 726 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 VN1R17PQ8TDU5 208 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 P2RX4Q99571 388 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 PNRC2Q9NPJ4 139 aaKnown RBP12.17□□□□□ -0.46
SCARB2-216ENST00000639300 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 TRBV6-7A0A0A0MS04 114 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 J3KRW8 73 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 M0R2Z0 102 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 CRYBB3P26998 211 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 CCKARP32238 428 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 ARF6P62330 175 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 ACSF3Q4G176 576 aaPredicted RBP12.17□□□□□ -0.46
SCARB2-216ENST00000639300 PQLC2Q6ZP29 291 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 ZGRF1Q86YA3 2104 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 OR5AL1P0C617 328 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 Q0VFX4 171 aa12.17□□□□□ -0.46
SCARB2-216ENST00000639300 RRHO14718 337 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 HIST1H1BP16401 226 aaKnown RBP12.16□□□□□ -0.46
SCARB2-216ENST00000639300 MC5RP33032 325 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 NHLH1Q02575 133 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 FXYD3Q14802 87 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 ECSCRQ19T08 205 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 C5orf17Q8NAS9 161 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 C1RLQ9NZP8 487 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 CUL9Q8IWT3 2517 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 PGPA6NDG6 321 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 EIF4E3Q8N5X7 224 aaKnown RBP12.16□□□□□ -0.46
SCARB2-216ENST00000639300 NPIPB3Q92617 1050 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 F2RL2O00254 374 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 CD55P08174 381 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 TRGC1P0CF51 173 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 AGAP20933 346 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 GPR6P46095 362 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-216ENST00000639300 KIAA1644Q3SXP7 199 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 LILRB1Q8NHL6 650 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-216ENST00000639300 ZNF596Q8TC21 504 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 DIRC2Q96SL1 478 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 PSMG3Q9BT73 122 aaPredicted RBP12.16□□□□□ -0.46
SCARB2-216ENST00000639300 METTL1Q9UBP6 276 aaKnown RBP12.16□□□□□ -0.46
SCARB2-216ENST00000639300 IFNL4K9M1U5 179 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 SRP19P09132 144 aaKnown RBP12.16□□□□□ -0.46
SCARB2-216ENST00000639300 CSRP2Q16527 193 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 RNF151Q2KHN1 245 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 SEMA5BQ9P283 1151 aa12.16□□□□□ -0.46
SCARB2-216ENST00000639300 ORM1P02763 201 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 TFF3Q07654 80 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 RNF24Q9Y225 148 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 MPZP25189 248 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 ZNF506Q5JVG8 444 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 NABP2Q9BQ15 211 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 SFXN3Q9BWM7 321 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 HIST1H1EP10412 219 aaKnown RBP12.15□□□□□ -0.46
SCARB2-216ENST00000639300 CD59P13987 128 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 MMD2Q8IY49 270 aa12.15□□□□□ -0.46
SCARB2-216ENST00000639300 CA2P00918 260 aa12.15□□□□□ -0.47
SCARB2-216ENST00000639300 CCL20P78556 96 aa12.15□□□□□ -0.47
SCARB2-216ENST00000639300 LRRC75BQ2VPJ9 315 aa12.15□□□□□ -0.47
SCARB2-216ENST00000639300 C18orf12Q96KH6 178 aa12.15□□□□□ -0.47
SCARB2-216ENST00000639300 SPRR3Q9UBC9 169 aa12.15□□□□□ -0.47
SCARB2-216ENST00000639300 GOSR1O95249 250 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 PEAR1Q5VY43 1037 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-216ENST00000639300 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 LINC01560Q8TB33 94 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 TBX15Q96SF7 602 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 DNAJC4Q9NNZ3 241 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 ZNF729A6NN14 1252 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-216ENST00000639300 SELENOTP62341 195 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 ID3Q02535 119 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 COX19Q49B96 90 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 STPG3Q8N7X2 389 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 STARD4Q96DR4 205 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 NPCDR1Q9BY65 106 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 E9PLN8 166 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 ACAA1P09110 424 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-216ENST00000639300 IBA57Q5T440 356 aaKnown RBP12.14□□□□□ -0.47
SCARB2-216ENST00000639300 ZNF385CQ66K41 422 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-216ENST00000639300 Q6ZN92 141 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 DOLPP1Q86YN1 238 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 ZNF525Q8N782 197 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 BMPERQ8N8U9 685 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 EAF1Q96JC9 268 aaPredicted RBP12.14□□□□□ -0.47
SCARB2-216ENST00000639300 WFDC1Q9HC57 220 aa12.14□□□□□ -0.47
SCARB2-216ENST00000639300 IGHV3-35A0A0C4DH35 117 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 RAMP3O60896 148 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 C8orf88P0DMB2 117 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 CD40P25942 277 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 NUBP1P53384 320 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 WDFY1Q8IWB7 410 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 OR4C13Q8NGP0 309 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 HIGD1AQ9Y241 93 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 LOC105371267A0A1B0GV96 52 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 IQCF6A8MYZ5 107 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 APCSP02743 223 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 PTTG1IPP53801 180 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 QRFPP83859 136 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms