RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 DBNDD1Q9H9R9 158 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 C14orf105Q9NVL8 296 aa-2.49□□□□□ -2.81
LMBR1-222ENST00000638959 VWFP04275 2813 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 TMEM269A0A1B0GVZ9 245 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 LYZL6O75951 148 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 LIPCP11150 499 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 MIFP14174 115 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 AKR1C4P17516 323 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 BTN3A2P78410 334 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 C1QTNF12Q5T7M4 302 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 LAMTOR1Q6IAA8 161 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 NANOGNBQ7Z5D8 188 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 LRRC34Q8IZ02 419 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 C8orf31Q8N9H6 132 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 INO80EQ8NBZ0 244 aaPredicted RBP-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 TFGQ92734 400 aaPredicted RBP-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 OPALINQ96PE5 141 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 TERF2IPQ9NYB0 399 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 HEATR1Q9H583 2144 aaKnown RBP-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 DNMT1P26358 1616 aaKnown RBP-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 ABCC12Q96J65 1359 aa-2.5□□□□□ -2.81
LMBR1-222ENST00000638959 NCF1BA6NI72 391 aaPredicted RBP-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 NCF1CA8MVU1 366 aaPredicted RBP-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 SULT1A3P0DMM9 295 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 SULT1A4P0DMN0 295 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 SPI1P17947 270 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 OR10J1P30954 320 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 EIF2B2P49770 351 aaKnown RBP-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 RGS8P57771 180 aaPredicted RBP-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 SPATA45Q537H7 98 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 SPANXN5Q5MJ07 72 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 IDO2Q6ZQW0 420 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 SPATA24Q86W54 205 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 EIF1ADQ8N9N8 165 aaKnown RBP-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 OR5K1Q8NHB7 308 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 CCL19Q99731 98 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 PRRG3Q9BZD7 231 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 PIK3R4Q99570 1358 aa-2.51□□□□□ -2.81
LMBR1-222ENST00000638959 SEC14L6B5MCN3 397 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 K7ERQ8 282 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 GATCO43716 136 aaKnown RBP-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 GMDSO60547 372 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 NOL3O60936 208 aaKnown RBP-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 CTSDP07339 412 aaPredicted RBP-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 SRMP19623 302 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 RAB38P57729 211 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 RPL37P61927 97 aaKnown RBP-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 SUPT4H1P63272 117 aaKnown RBP-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 RAD51Q06609 339 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 BAXQ07812 192 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 LRRC74AQ0VAA2 488 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 GPM6BQ13491 265 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 SPINK13Q1W4C9 94 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 RNASE10Q5GAN6 216 aaKnown RBP-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 BEX5Q5H9J7 111 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 Q6ZQT0 140 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 OR4C5Q8NGB2 326 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 CPNE2Q96FN4 548 aaPredicted RBP-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 TMEM147Q9BVK8 224 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 BEX2Q9BXY8 128 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 WFDC10AQ9H1F0 79 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 PHLPP2Q6ZVD8 1323 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 CCDC88AQ3V6T2 1871 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 MYO15BQ96JP2 1530 aa-2.52□□□□□ -2.81
LMBR1-222ENST00000638959 TEX46H3BTG2 121 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 SPAG6O75602 509 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 HAAOP46952 286 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 C1QTNF8P60827 252 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 DYNC1I2Q13409 638 aaKnown RBP-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 DEFB109BQ30KR1 87 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 DUPD1Q68J44 220 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 C11orf40Q8WZ69 217 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 C12orf43Q96C57 262 aaKnown RBP-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 LPAR5Q9H1C0 372 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 MIXL1Q9H2W2 232 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 ACOT13Q9NPJ3 140 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 TUBG2Q9NRH3 451 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 HSPB8Q9UJY1 196 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 AP1M2Q9Y6Q5 423 aa-2.53□□□□□ -2.81
LMBR1-222ENST00000638959 CHD6Q8TD26 2715 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 MGAMO43451 1857 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 PKDREJQ9NTG1 2253 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 TRAV8-7A0A075B6U6 113 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 C9JCJ5 164 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 SULT1B1O43704 296 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 CYTH3O43739 400 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 TCL1BO95988 128 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 ROMO1P60602 79 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 DYNLL1P63167 89 aaKnown RBP-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 FAM183BPQ6ZVS7 135 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 FAM228AQ86W67 206 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 C1orf174Q8IYL3 243 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 OR51L1Q8NGJ5 315 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 DOK4Q8TEW6 326 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 TMEM106AQ96A25 262 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 C16orf45Q96MC5 204 aaPredicted RBP-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 MRPL27Q9P0M9 148 aaKnown RBP-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 COQ4Q9Y3A0 265 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 NINLQ9Y2I6 1382 aa-2.54□□□□□ -2.82
LMBR1-222ENST00000638959 CHD5Q8TDI0 1954 aa-2.54□□□□□ -2.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms