RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 IGHV3-20A0A0C4DH32 117 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 VSIG10L2P0DP72 767 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 CCL26Q9Y258 94 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 A0A1W2PP11 408 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 NUTF2P61970 127 aaKnown RBP13.07□□□□□ -0.32
UBE3A-227ENST00000638011 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 DNAJC30Q96LL9 226 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 AMER3Q8N944 861 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 ADRA2AP08913 450 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 PRRC2AP48634 2157 aaKnown RBP13.07□□□□□ -0.32
UBE3A-227ENST00000638011 ORMDL2Q53FV1 153 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 FAM159AQ6UWV7 190 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 TMEM86BQ8N661 226 aa13.07□□□□□ -0.32
UBE3A-227ENST00000638011 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 KRTCAP3Q53RY4 240 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 INO80CQ6PI98 192 aaPredicted RBP13.06□□□□□ -0.32
UBE3A-227ENST00000638011 TMEM170AQ8WVE7 144 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 LIPT2A6NK58 231 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 RFLNAQ6ZTI6 216 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 GPR146Q96CH1 333 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 RSPO3Q9BXY4 272 aaPredicted RBP13.06□□□□□ -0.32
UBE3A-227ENST00000638011 RNF7Q9UBF6 113 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 IZUMO1RA6ND01 250 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 ZNF83P51522 516 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 MMDQ15546 238 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 DCAF12L2Q5VW00 463 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 PLSCR4Q9NRQ2 329 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 NDUFA2O43678 99 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 POU2AF1Q16633 256 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 SMIM14Q96QK8 99 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 SARGQ9BW04 601 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 PAX1P15863 534 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 PTGDSP41222 190 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 SSPNQ14714 243 aa13.06□□□□□ -0.32
UBE3A-227ENST00000638011 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 KIAA0040Q15053 153 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 ATG4DQ86TL0 474 aaPredicted RBP13.05□□□□□ -0.32
UBE3A-227ENST00000638011 RHOGP84095 191 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 FSCN3Q9NQT6 498 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 FAM181BA6NEQ2 426 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 RUNX1Q01196 453 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 PIGYQ3MUY2 71 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 FNDC4Q9H6D8 234 aaPredicted RBP13.05□□□□□ -0.32
UBE3A-227ENST00000638011 ST6GALNAC2Q9UJ37 374 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 GPX1P07203 203 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 RAX2Q96IS3 184 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 CSPG4Q6UVK1 2322 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 IGHV3-43A0A0B4J1X8 118 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 IGHV3-43DP0DP04 118 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 RPL27AP46776 148 aaKnown RBP13.05□□□□□ -0.32
UBE3A-227ENST00000638011 UBE2V1Q13404 147 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 TMEM8BA6NDV4 472 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 H2BFSP57053 126 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 MS4A5Q9H3V2 200 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 CEACAM21Q3KPI0 293 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 GFRALQ6UXV0 394 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 ZNF479Q96JC4 524 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 CITED2Q99967 270 aaPredicted RBP13.05□□□□□ -0.32
UBE3A-227ENST00000638011 MYO18BQ8IUG5 2567 aa13.05□□□□□ -0.32
UBE3A-227ENST00000638011 SFTPCP11686 197 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 SYNGR3O43761 229 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 RTP5Q14D33 572 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 WDR54Q9H977 334 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 ZNF415Q09FC8 603 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 NRN1Q9NPD7 142 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 SLC25A10Q9UBX3 287 aaPredicted RBP13.04□□□□□ -0.32
UBE3A-227ENST00000638011 LY75O60449 1722 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 CD200R1LQ6Q8B3 271 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 GNRHR2Q96P88 292 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 PGPA6NDG6 321 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 TNFSF13O75888 250 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 APOHP02749 345 aaPredicted RBP13.04□□□□□ -0.32
UBE3A-227ENST00000638011 ID4P47928 161 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 PSG6Q00889 435 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 CADM4Q8NFZ8 388 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 FAM117AQ9C073 453 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 NPFFR1Q9GZQ6 430 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 A0A0G2JLM5 398 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 NPIPB4C9JG80 1138 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 TNFRSF18Q9Y5U5 241 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 TRAV21A0A0B4J279 112 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 IGHV1-69-2A0A0G2JMI3 117 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 C8orf82Q6P1X6 216 aaPredicted RBP13.04□□□□□ -0.32
UBE3A-227ENST00000638011 TMEM91Q6ZNR0 172 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 ZNF488Q96MN9 340 aa13.04□□□□□ -0.32
UBE3A-227ENST00000638011 C1QL1O75973 258 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 HBDP02042 147 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 C1QTNF9P0C862 333 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 COX7A1P24310 79 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 GAGE12BA1L429 117 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 IFI6P09912 130 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 A0A0G2JMM0 328 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 A0A1W2PPB8 328 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 A0A1W2PPC1 479 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 HIGD1CA8MV81 97 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 KIR3DP1A8MWS1 328 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 DLEU1O43261 78 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 PRKNO60260 465 aaPredicted RBP13.03□□□□□ -0.32
UBE3A-227ENST00000638011 FUT5Q11128 374 aa13.03□□□□□ -0.32
UBE3A-227ENST00000638011 C5orf66Q9H5L9 145 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms