RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 CNTFRP26992 372 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 BIVMQ86UB2 503 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 WNT10AQ9GZT5 417 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 FXYD3Q14802 87 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 ACSF3Q4G176 576 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 LBHQ53QV2 105 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 CBLN2Q8IUK8 224 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 LIPFP07098 398 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 HOXA6P31267 233 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 PNKDQ8N490 385 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 ZPLD1Q8TCW7 415 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 MARS2Q96GW9 593 aaKnown RBP13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 CA1P00915 261 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 C1QAP02745 245 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 NPPCP23582 126 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 TSPOP30536 169 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 C11orf44Q8N8P7 122 aa13.73□□□□□ -0.21
CACNA1A-221ENST00000636012 TRIOBPQ9H2D6 2365 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 RBMY1BA6NDE4 496 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 RBMY1EA6NEQ0 496 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 PRB1P04280 392 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 RBMY1DP0C7P1 496 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 RBMY1A1P0DJD3 496 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 RBMY1CP0DJD4 496 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 MUC1P15941 1255 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 WNT2BQ93097 391 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 LOXL4Q96JB6 756 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 CENPVL1A0A0U1RR11 272 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 FAM27BQ5VT28 67 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 DUX3Q96PT4 197 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 ALKBH7Q9BT30 221 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 GBF1Q92538 1859 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 ARL14EPLP0DKL9 152 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 HBBP68871 147 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 IGHV3-64A0A075B6Q5 118 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 TRAV8-2A0A0B4J237 113 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 TRGV3P03979 118 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 SLC25A45Q8N413 288 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 LRRC3BQ96PB8 259 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 QTRT1Q9BXR0 403 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 KCNK7Q9Y2U2 307 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 LOC285556D6RIA3 1793 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 SPTBN2O15020 2390 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 RUNX1Q01196 453 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 HIST1H1AQ02539 215 aaPredicted RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 MMD2Q8IY49 270 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 SRSF12Q8WXF0 261 aaKnown RBP13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 S4R3C0 116 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 FOXH1O75593 365 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 TMEM70Q9BUB7 260 aa13.72□□□□□ -0.21
CACNA1A-221ENST00000636012 KLF14Q8TD94 323 aaPredicted RBP13.71□□□□□ -0.21
CACNA1A-221ENST00000636012 STRCP1A6NGW2 1772 aa13.71□□□□□ -0.21
CACNA1A-221ENST00000636012 NDUFA2O43678 99 aa13.71□□□□□ -0.21
CACNA1A-221ENST00000636012 IFNL4K9M1U5 179 aa13.71□□□□□ -0.21
CACNA1A-221ENST00000636012 EIF3GO75821 320 aaKnown RBP eCLIP13.71□□□□□ -0.21
CACNA1A-221ENST00000636012 PRDM6Q9NQX0 595 aa13.71□□□□□ -0.22
CACNA1A-221ENST00000636012 NAT1P18440 290 aa13.71□□□□□ -0.22
CACNA1A-221ENST00000636012 RND2P52198 227 aa13.71□□□□□ -0.22
CACNA1A-221ENST00000636012 NUTF2P61970 127 aaKnown RBP13.71□□□□□ -0.22
CACNA1A-221ENST00000636012 HOGA1Q86XE5 327 aa13.71□□□□□ -0.22
CACNA1A-221ENST00000636012 CLEC7AQ9BXN2 247 aa13.71□□□□□ -0.22
CACNA1A-221ENST00000636012 SRSF4Q08170 494 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 TNFRSF18Q9Y5U5 241 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 PTPRDP23468 1912 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 PLXND1Q9Y4D7 1925 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 HSPB1P04792 205 aaKnown RBP13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 ODAMA1E959 279 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 CYB561D1Q8N8Q1 229 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 TRGV2A0A075B6R0 118 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 C7orf77A4D0Y5 90 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 FOXI3A8MTJ6 420 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 H0Y980 276 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 MIC13Q5XKP0 118 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 GLMPQ8WWB7 406 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 DSPPQ9NZW4 1301 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 GFI1BQ5VTD9 330 aa13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 SSBP3Q9BWW4 388 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 COL25A1Q9BXS0 654 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-221ENST00000636012 M0QZK8 103 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 SYNGR3O43761 229 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 GGCTO75223 188 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 C1orf122Q6ZSJ8 110 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 CST9LQ9H4G1 147 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 ZNF430Q9H8G1 570 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 YAE1D1Q9NRH1 226 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 CACNA1GO43497 2377 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 TRAV30A0A087WSZ9 112 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 M0R381 172 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 FAM168AQ92567 244 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 PRB4P10163 310 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 KIR3DL3Q8N743 410 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 TMEM106BQ9NUM4 274 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 LOC101059948A0A1B0GTJ6 334 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 CEACAM4O75871 244 aa13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 F12P00748 615 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-221ENST00000636012 NANOS3P60323 173 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 CD69Q07108 199 aa13.68□□□□□ -0.22
CACNA1A-221ENST00000636012 ZP4Q12836 540 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms