RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 CHD3Q12873 2000 aaKnown RBP12.86□□□□□ -0.35
CLN8-209ENST00000635970 A0A1B0GV90 55 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 B9A039 149 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 H3BP45 60 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 TNFSF12O43508 249 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 AMBPP02760 352 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 SRP14P37108 136 aaKnown RBP12.85□□□□□ -0.35
CLN8-209ENST00000635970 GPM6AP51674 278 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 MRPL21Q7Z2W9 205 aaKnown RBP12.85□□□□□ -0.35
CLN8-209ENST00000635970 ZCCHC24Q8N2G6 241 aaKnown RBP12.85□□□□□ -0.35
CLN8-209ENST00000635970 TMEM170AQ8WVE7 144 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 LHX4Q969G2 390 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 SSX3Q99909 188 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 NDUFAF3Q9BU61 184 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 IGLV3-9A0A075B6K5 115 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 RNF212BA8MTL3 300 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 H7BYZ3 331 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 NXPH3O95157 252 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 VENTXO95231 258 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 TYMSP04818 313 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 GALR1P47211 349 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 KLF3P57682 345 aaPredicted RBP12.85□□□□□ -0.35
CLN8-209ENST00000635970 SSX2Q16385 188 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 C16orf82Q7Z2V1 217 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 ZNF573Q86YE8 665 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 VSIRQ9H7M9 311 aa12.85□□□□□ -0.35
CLN8-209ENST00000635970 OR5B21A6NL26 309 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 MYO9AB2RTY4 2548 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 MAST4O15021 2626 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 HRASP01112 189 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 GCH1P30793 250 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 COL10A1Q03692 680 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 ADIRFQ15847 76 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 ZNF718Q3SXZ3 478 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 OR51H1Q8NH63 302 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 TMEM18Q96B42 140 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 MBD6Q96DN6 1003 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 GPHA2Q96T91 129 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 BEX4Q9NWD9 120 aaPredicted RBP12.84□□□□□ -0.35
CLN8-209ENST00000635970 MPC1Q9Y5U8 109 aa12.84□□□□□ -0.35
CLN8-209ENST00000635970 CTXND1A0A1B0GTU2 59 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 XKRY2A2RUG3 117 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 VSTM5A8MXK1 200 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 FGF8P55075 233 aaPredicted RBP12.83□□□□□ -0.35
CLN8-209ENST00000635970 SPCS3P61009 180 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 RPL23P62829 140 aaKnown RBP12.83□□□□□ -0.35
CLN8-209ENST00000635970 ARL16Q0P5N6 197 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 PSG7Q13046 419 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 HNF4GQ14541 408 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 MBNL2Q5VZF2 373 aaKnown RBP12.83□□□□□ -0.35
CLN8-209ENST00000635970 Q6ZRM9 215 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 OR4C12Q96R67 309 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 PKIBQ9C010 78 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 PRO1933Q9H354 126 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 DYNLRB1Q9NP97 96 aa12.83□□□□□ -0.35
CLN8-209ENST00000635970 LY6HO94772 140 aa12.83□□□□□ -0.36
CLN8-209ENST00000635970 LCN2P80188 198 aa12.83□□□□□ -0.36
CLN8-209ENST00000635970 TMEM14EPQ6UXP3 125 aa12.83□□□□□ -0.36
CLN8-209ENST00000635970 OR51I2Q9H344 312 aa12.83□□□□□ -0.36
CLN8-209ENST00000635970 GAB2Q9UQC2 676 aa12.83□□□□□ -0.36
CLN8-209ENST00000635970 PRRC2AP48634 2157 aaKnown RBP12.83□□□□□ -0.36
CLN8-209ENST00000635970 J3QW42 95 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 SLC33A1O00400 549 aaPredicted RBP12.82□□□□□ -0.36
CLN8-209ENST00000635970 GGCTO75223 188 aaKnown RBP12.82□□□□□ -0.36
CLN8-209ENST00000635970 IGKV1-39P01597 117 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 IGHV3-13P01766 116 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 IGHV4-39P01824 125 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 IGKV1D-39P04432 117 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 ATP5J2P56134 94 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 SLC38A11Q08AI6 406 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 KCNIP4Q6PIL6 250 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 ZNF66Q6ZN08 573 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 SSX7Q7RTT5 188 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 HAPLN4Q86UW8 402 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 ZBTB34Q8NCN2 500 aa12.82□□□□□ -0.36
CLN8-209ENST00000635970 FGF23Q9GZV9 251 aaPredicted RBP12.82□□□□□ -0.36
CLN8-209ENST00000635970 SOX15O60248 233 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 IGKV1-5P01602 117 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 IAPPP10997 89 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 CD99P14209 185 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 PPOXP50336 477 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 SELENOVP59797 346 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 GNG3P63215 75 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 IQCJQ1A5X6 159 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 ACTL10Q5JWF8 245 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 C1orf174Q8IYL3 243 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 FAM58AQ8N1B3 248 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 ZNF664Q8N3J9 261 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 RPP25LQ8N5L8 163 aaKnown RBP12.81□□□□□ -0.36
CLN8-209ENST00000635970 OR5P3Q8WZ94 311 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 IMMP2LQ96T52 175 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 TRAV24A0A0B4J272 114 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 FOXC2Q99958 501 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 MSL2Q9HCI7 577 aa12.81□□□□□ -0.36
CLN8-209ENST00000635970 ANKRD30BLA7E2S9 258 aa12.8□□□□□ -0.36
CLN8-209ENST00000635970 HSPB6O14558 160 aa12.8□□□□□ -0.36
CLN8-209ENST00000635970 TIMM8AO60220 97 aaPredicted RBP12.8□□□□□ -0.36
CLN8-209ENST00000635970 LILRA1O75019 489 aa12.8□□□□□ -0.36
CLN8-209ENST00000635970 IGLV2-14P01704 120 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms