RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 TRBV9A0A0B4J1U6 114 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 YIF1AO95070 293 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 CEBPDP49716 269 aaPredicted RBP3.78□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM177Q53S58 311 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 C11orf53Q8IXP5 236 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 ABHD5Q8WTS1 349 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 BORCS7Q96B45 105 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 FGF23Q9GZV9 251 aaPredicted RBP3.78□□□□□ -1.8
SCN1A-210ENST00000635776 KCNAB3O43448 404 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 UBE2G1P62253 170 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 SPACA3Q8IXA5 215 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 DAZAP1Q96EP5 407 aaKnown RBP3.78□□□□□ -1.8
SCN1A-210ENST00000635776 SRD5A3Q9H8P0 318 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 C15orf65H3BRN8 121 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 LILRA1O75019 489 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 LIPFP07098 398 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 BRS3P32247 399 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 PAX9P55771 341 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 CLEC9AQ6UXN8 241 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 TPRX1Q8N7U7 411 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 ST6GALNAC3Q8NDV1 305 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF430Q9H8G1 570 aaPredicted RBP3.78□□□□□ -1.8
SCN1A-210ENST00000635776 LINC00574Q9H8X3 128 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 FREM3P0C091 2139 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 PI4KAP42356 2102 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 FBLL1A6NHQ2 334 aaKnown RBP3.78□□□□□ -1.8
SCN1A-210ENST00000635776 TSTD3H0UI37 97 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 PAGE4O60829 102 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 CCKARP32238 428 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 RPL27AP46776 148 aaKnown RBP3.78□□□□□ -1.8
SCN1A-210ENST00000635776 RELBQ01201 579 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 DNLZQ5SXM8 178 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 ZNRF1Q8ND25 227 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 INSIG2Q9Y5U4 225 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 PCDH15Q96QU1 1955 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 ATG2AQ2TAZ0 1938 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 INS-IGF2F8WCM5 200 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 OR7C2O60412 319 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 QTRT1Q9BXR0 403 aaKnown RBP3.78□□□□□ -1.8
SCN1A-210ENST00000635776 IFI27L2Q9H2X8 130 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 ZDBF2Q9HCK1 2354 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 ENSAO43768 121 aaKnown RBP3.78□□□□□ -1.8
SCN1A-210ENST00000635776 GYPAP02724 150 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 STAG3L2P0CL84 134 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 STAG3L3P0CL85 134 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 C8orf88P0DMB2 117 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 GALR1P47211 349 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 ICAM4Q14773 271 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 TBR1Q16650 682 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 NCMAPQ5T1S8 102 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 CMTM2Q8TAZ6 248 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 LRFN3Q9BTN0 628 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 CLEC7AQ9BXN2 247 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 FUT9Q9Y231 359 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 CCL21O00585 134 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 LHBP01229 141 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 GNG10P50151 68 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 RAB9AP51151 201 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 OR4P4Q8NGL7 312 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 OR10G8Q8NGN5 311 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 GAFA1Q96PS6 74 aa3.78□□□□□ -1.8
SCN1A-210ENST00000635776 RAB4AP20338 218 aa3.78□□□□□ -1.81
SCN1A-210ENST00000635776 AGAP20933 346 aa3.78□□□□□ -1.81
SCN1A-210ENST00000635776 GPR6P46095 362 aaPredicted RBP3.78□□□□□ -1.81
SCN1A-210ENST00000635776 PPOXP50336 477 aa3.78□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF90Q03938 601 aa3.78□□□□□ -1.81
SCN1A-210ENST00000635776 BSPH1Q075Z2 132 aa3.78□□□□□ -1.81
SCN1A-210ENST00000635776 USF2Q15853 346 aaPredicted RBP3.78□□□□□ -1.81
SCN1A-210ENST00000635776 SPSB3Q6PJ21 355 aa3.78□□□□□ -1.81
SCN1A-210ENST00000635776 MUC15Q8N387 334 aa3.78□□□□□ -1.81
SCN1A-210ENST00000635776 SAA2-SAA4A0A096LPE2 208 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 COLCA2A8K830 154 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 SAA2P0DJI9 122 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-210ENST00000635776 FBXL19-AS1Q494R0 122 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM155Q4W5P6 130 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF581Q9P0T4 197 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 FAM78BQ5VT40 261 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 ABHD12Q8N2K0 398 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 AHCTF1Q8WYP5 2266 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 IGHV3OR15-7A0A075B7D8 119 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 TMEM178BH3BS89 294 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 NDUFA6P56556 154 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 SNRPEP62304 92 aaKnown RBP3.77□□□□□ -1.81
SCN1A-210ENST00000635776 FABP9Q0Z7S8 132 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 HS3ST6Q96QI5 342 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF835Q9Y2P0 537 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 A0A1W2PRE2 83 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 IGKV1-39P01597 117 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 IGKV1D-39P04432 117 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 ANOS1P23352 680 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 TAS2R60P59551 318 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 RPL30P62888 115 aaKnown RBP3.77□□□□□ -1.81
SCN1A-210ENST00000635776 TCF15Q12870 199 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 C10orf113Q5VZT2 155 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 PRSS33Q8NF86 280 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 PLPPR2Q96GM1 343 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 ZNF331Q9NQX6 463 aaPredicted RBP3.77□□□□□ -1.81
SCN1A-210ENST00000635776 XKRY2A2RUG3 117 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 GNG4P50150 75 aa3.77□□□□□ -1.81
SCN1A-210ENST00000635776 RND2P52198 227 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms